| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1378 |
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| Symbol | |
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| ID | 5746933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1535131 |
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| End bp | 1536195 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296457 |
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| Product | porin |
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| Protein accession | YP_001562407 |
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| Protein GI | 160896825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0478872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCACA AGCATTGGCT GGCCGCCGGC GGCATGGCGG CCCTGGGCAT GTCCGCGTGG
GCCCAGAGCA GCGTGGAGAT GTTCGGCATC GTCGACGTCC ACATCAACAG CGCAAGGTCG
GGCGCCACGC GCCTGAGCCG GCTGGAGGAC GGGGGCAGCG CGGCATCGCG CATCGGCTTT
CGCGGCAGCG AGGACCTGGG CGGCGGCCTG CGCGCCCAGT TCATGCTGGA GGCCGGCGTG
GCGCCGGACA CGGGCCTGGG CACCATTCCC GGCCCGGGCC TGGCCTTCAC GCGGCAGGCC
TGGGTGGGGC TGAACAGCGG CTGGGGCGCC GTGGAGATGG GCCGCATGTA CACGCCCATG
TTCGGCGCGC TGTTCCGGGC CGATCCGCTG GGCATGAACG CGCTGTTTTC CTCGCTGAAC
CTGGTGTCGG CCACCGATGC CCAGGCCGGC CTGCGGCCGT TTGCGGCGCG GGCCAACAAC
CTGGTGCGCT ACCGCACGCC GGCAGGCCAG CCCTGGCTGG CGGACCTGGC CTATTCCTTC
GGCGAAGTGG CTTCGCCGAA CAGCAGCAAC GGCCGCCTCT ACGGCGCCAC GCTGGGCTGG
AACCAGAAGC CCTGGTTCCT GGCCTACAGC TTCCAGAAGT CCGTGGAAGG CAGCGCCGCC
GCACCCGTGG CCGCGCCCGC CACCAGCCAG TACCAGGCAC TGTCGGCCAG CTGGGAGGCC
CTGGACGGGC TGCGCCTGAC GGGCAACTAC GTCATCAACC GCGTGGACCG TGCCGGCACA
CCCAAGGCGA AGCTGGCCCA GCTGGGCGCC GATTGGAGCG TGGATTCGCG CTCCAAGCTG
CTGGTCTCGG TGGCGCGGCG CGAGGTGGGC GGCACGGACC GCGCCCAGAA CACCTGGACG
CTGGGCTACG ACTACGCGCT GAGCAAGCGC ACCGTGCTCT ACGCGCGCTG GCTGCAGCTG
GGCAACGCGG CCAATGCCTC GGCCGCCATT GCCAACGTGC CGGTGGCCGC CAACAGCGGC
GACGGCGTGC GGTCCCTGGC GCTGGGCGTG CGCCACAACT TCTGA
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| Protein sequence | MKHKHWLAAG GMAALGMSAW AQSSVEMFGI VDVHINSARS GATRLSRLED GGSAASRIGF
RGSEDLGGGL RAQFMLEAGV APDTGLGTIP GPGLAFTRQA WVGLNSGWGA VEMGRMYTPM
FGALFRADPL GMNALFSSLN LVSATDAQAG LRPFAARANN LVRYRTPAGQ PWLADLAYSF
GEVASPNSSN GRLYGATLGW NQKPWFLAYS FQKSVEGSAA APVAAPATSQ YQALSASWEA
LDGLRLTGNY VINRVDRAGT PKAKLAQLGA DWSVDSRSKL LVSVARREVG GTDRAQNTWT
LGYDYALSKR TVLYARWLQL GNAANASAAI ANVPVAANSG DGVRSLALGV RHNF
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