Gene Daci_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1376 
Symbol 
ID5746931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1531985 
End bp1533007 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID641296455 
Producthypothetical protein 
Protein accessionYP_001562405 
Protein GI160896823 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.537354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA ATGCCCATTC CATCTCCTGC CCGGAGGCCA CCATGAACAC ACCCCTGCTG 
CGCACCACCG CGCTGACCTG CCTTGCCCTG GCCTGCAGCG CCGCGCTGGC CCAGGACGGC
TATCCCGCCC GGCCCGTGCG CATCGTCGTG CAATACCAGG CCGGCGGCTC CACCGACACC
GTGGCGCGCA TCCTGGCCGA GGGCCTGGCC AAGCGCCTGG GCCAGCCCGT GGTGGTGGAC
AACCGCAGCG GCGCGGGCGG CATCATCGGC ACCGAGCATG TGGCCAAGAG CGTGCCCGAC
GGCCACACCC TGCTGCTGAC CGTGCCCGGG CCCATCACGG CCAACCTGGT GCTCTACAAG
AAGCTGCCCT ACGACCCGCG CACCGAGCTG CGCATGGTCT CGGACGTGGT CTCGCCCTCC
ATGGTGATGG CCGTCAACCC GGCCGTGCCG GCCAAAGACT TCAAGGGCCT GGTCGAGGCC
GTGCGCCAGT CGCCGGGCAA GTACGCCATG GGTTCCTGGG GGGCGGGCAC GCAGCCGCAC
CAGGTCCAGG TCTTCATGGA CAAGGCCTAC GGCCTGCAGT CGCTGCACGT GGCCTACAAG
GGCGAGGGGC CCATGTCCAT CGACCTGATC AGTGGCGTGA TCCAGATGAC GCTGGGCTCG
GCCGCCACGC TCAAGCCCTT CATCGACGCT GGCAAGCTGC GCGCCCTGGC CGTGGCAGGA
CCGCGCCGCA GCAAGGCACT GCCCGATGTG CCCACCTTTG CCGAGCAGGG CTACCGCGAG
CCCGTGTATG CCATCACGGG ATCGATCTCG CTGATGGCGC CCGCGCGCAC GCCCGACGCC
ATCGTCGAAC GCCTGGGCCG CGAGGTGGCC GCCGTGATGC GCGAGCCCCA GGTGCGCCAG
CGTGTCGAGG CGCTGGGCCT GGAGGCCCAG GGCAACAGCC CGGCCGAGGC CAGCGCCGCC
TACGCCGCCT TTTTGCCCGT GGCGCTGGAC CTGGCGCGCT CCACGGGCGT GACCCTCGAC
TGA
 
Protein sequence
MKANAHSISC PEATMNTPLL RTTALTCLAL ACSAALAQDG YPARPVRIVV QYQAGGSTDT 
VARILAEGLA KRLGQPVVVD NRSGAGGIIG TEHVAKSVPD GHTLLLTVPG PITANLVLYK
KLPYDPRTEL RMVSDVVSPS MVMAVNPAVP AKDFKGLVEA VRQSPGKYAM GSWGAGTQPH
QVQVFMDKAY GLQSLHVAYK GEGPMSIDLI SGVIQMTLGS AATLKPFIDA GKLRALAVAG
PRRSKALPDV PTFAEQGYRE PVYAITGSIS LMAPARTPDA IVERLGREVA AVMREPQVRQ
RVEALGLEAQ GNSPAEASAA YAAFLPVALD LARSTGVTLD