Gene Daci_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1375 
Symbol 
ID5746930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1530563 
End bp1531960 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content73% 
IMG OID641296454 
Producthypothetical protein 
Protein accessionYP_001562404 
Protein GI160896822 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGA ACCCGACCCC TCCCTCCCTG CCCGAAGTCC GCCGCGCCCT GGCGCGCTCC 
ATCGGCCTGG CCGCCTTTGT CTACGGCTAT CCGCTGATAG AGACCTACCG CACCTGCCGC
CTGCAGACCG ATGCCGGCGC CGCACGTGCC ACCGGTCTGA GTGTGGGCCT GGGCCTGGAC
ATGCGCGGCG ACTTCGACAC GCTGCACCAC AGCCAGCGCC CCTCCACCCA TGAGGACCGC
GACGTGGTCA CGCCCGCCAA CGACCTGCTG TACTCGCTGG CCTGGATCCA CCTGGCCGAC
GGCCCGCGCC TGCTGACCGT GCCCTCCAGC GCCGCGCATC CGGGCCGCTA TTTCGTGCTG
GCCCTGTACG ACGCCTATAC CGAGAATTTC GAGAACCTGG GCCCGCGCAA CTGCGCGCCC
GAAGGCGAGA CCGTGGTCCT GGTCGGGCCG GGCGGCCAGG TGCCGGAACA CCTGGCCGGC
CACCGCCTGG TGCACTGCCC CAGCAACCTG GTCTGGCTGA TCGGCCGCAC CGTGGTGGGC
GATGCGCCCG ACTGGCCTGC AGCCCGCGCG CTGCAGGCCG ACATCCGGCT GGAGCCCGCG
CCGGGCGTGC CGAAAGGAGG CCGCCCGGCC GCCGTCGCGA ACTGGGTCGG CCCGCCCGTG
GACGCCATGG CGGCCGCCTT CGAGAACCAG GAGCCTGCGG CCGAGGTTGC GCCGCGCTTT
TTCACCAACC TCTGCCATGC GCTGGCCGAG GCGCCTGGCC GCAAGGAGGA CCAGGGGCTG
CTGGCCTGGT TCGGCCAGGC CGGCCTGGTG GCCAGCGCCC ACATGGCGTG GGAGCAGCTG
GAGGAGCCCG TGCGCGAAGG CCTGACCGAG GGCTTTGCCG ACGGCGTGCG CACCGTGGCC
GCCATGGGGC GCAACCGCCG CCCCCGGCCC TGGACCATGA CGCCGTCCAC CGGCCGCTAC
GGCAGCGAGT ACCTCGGCCG CGCACGCACC GCCTACCTGG GCCTGGGCGC GCTGGCCACC
AGCGAGGCCA TCTACGCGGC CGCCCACCAC GACGCAGGCC TGCAGCCGCT GGACGGCAGC
CAGCGCTATG TGCTGCGCTT CGATGCCGCC GACATGCCGC CGGCCGATGC CTTCTGGTCC
GTCACCCTGT ACGACGCCGA CCGCTTTCTC TACGGCAACG AGATCGGCCG CCACTCCATC
GGCGACCGCA CGCCGGGATT GCTGCGCGAG GCCGACGGCA GCCTGCAGAT CGACCTGGGC
CATGCCCGAC CGGCACAGGG CGCCGCCAAC TGGCTGCCCA CGCCGCACGG GCGCTTCTAC
CTCATCCTGC GCATGTACCA CCCGCAGGCA GGCGCGCACC AATGGCCTGT TCCGCCCCTG
CAGCCCGTGG CCGCATGA
 
Protein sequence
MDMNPTPPSL PEVRRALARS IGLAAFVYGY PLIETYRTCR LQTDAGAARA TGLSVGLGLD 
MRGDFDTLHH SQRPSTHEDR DVVTPANDLL YSLAWIHLAD GPRLLTVPSS AAHPGRYFVL
ALYDAYTENF ENLGPRNCAP EGETVVLVGP GGQVPEHLAG HRLVHCPSNL VWLIGRTVVG
DAPDWPAARA LQADIRLEPA PGVPKGGRPA AVANWVGPPV DAMAAAFENQ EPAAEVAPRF
FTNLCHALAE APGRKEDQGL LAWFGQAGLV ASAHMAWEQL EEPVREGLTE GFADGVRTVA
AMGRNRRPRP WTMTPSTGRY GSEYLGRART AYLGLGALAT SEAIYAAAHH DAGLQPLDGS
QRYVLRFDAA DMPPADAFWS VTLYDADRFL YGNEIGRHSI GDRTPGLLRE ADGSLQIDLG
HARPAQGAAN WLPTPHGRFY LILRMYHPQA GAHQWPVPPL QPVAA