Gene Daci_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1374 
Symbol 
ID5746929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1529229 
End bp1530566 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content72% 
IMG OID641296453 
Producthypothetical protein 
Protein accessionYP_001562403 
Protein GI160896821 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACG CCATGGACCT GAGCGCACTG GCCGAAGAGG CCGTCATCCA CACCTGCCCG 
CTGTACGAGA TGCGCCGCAT GCGCGCGGCC ACCTCGCCCC GGCGCAATGC GGCCGGCGAG
GCCGCACCAG CCCCGCTGCG CTGGTGCAAC CAGTTCGTGC ATGCGCGCCA GCTGCTGCGC
GCCGGCACCA GCCGCGTGGT CACGCCCAAC AACGACACGC TCTACACCAA CGCCTGGCTG
GACCTGGGCG CCGGACCGCT GGTGATCGAT GTGCCCGACA CGGCGGGCCG CTACTACGTG
CTGGGCCTGC TGGACTTCTT CACCAACCCC TTCGCCCACC TGGGCCAGCG CCTGACGGGC
ACGGCTGCGC GCTCCTTCCT TGTCACGCCG CCCGGCTGGC AGGGGGCGCT GCCGCCACCG
TTCGATGCGC CCGGCGCACA CATTGCCGCG CCCACGCCCT GGCTGTGGGT GATAGGCCGC
ATCCTGGTCG ATGGCGTGCA TGACCTGCCC GCCGTGCACG CGCTGCAGGA CGGCTTTGCG
GTGCGCCCGC TGGCCGACTG GCAGGCGGGC ACGCCCTCGC AGGCCCGTGC CTTCGACCCG
GACTGCGATC CCCAGGCCCC GCCAAATGCC GAGCACTATG CAGCCCAGGT GAATGCCGCC
TTGCGCGACA ACCCGCCGCC GGCAGGGCAT GCCGCACGGG TCGCGCGCTT TGCGGCCGTG
GGCCTGGGCG CCGGGCTGGG CGCACCCGAT GCGCAACAGC AAGCCGCACT GCAGCGCGCG
CTGGACAGCG TGCTGCCCCG GCTGCGCGCG GCCAGCACGG GCCGGCGCCT TGACTCGGGC
TGGGAACTCC CCGCACTGGT CGAAGGCAGT TTTGGCGACG ACTTCCAGGC CCGCGCCGAA
ATTGCGTTCA AGTACATCGG CATGCTGGAA AGCCGCGAGG CCATCTACCC GCTGGCCTGG
CATGACGCCC GGGGCCGGCC CCTGGACGGC AGCCGCCGCT ACCGGCTGCG CTTTGCCCCA
GGCGCGCTGC CGCCCGTGCA GGCCTTCTGG TCCCTGACCC TCTACGGCGC CCACGACTGC
ATGCTGGTGG ACAACCCCAT CGACCGCCAT GCGATCGGCG ACCGCACGCC GGGCCTGTGC
CCCGACTCTG ATGGCGATGG CGGGTTGACT ATCCACATCA GCCACGCGCC ACCGGCCAGC
GAAGAACACC GAGCCAACTG GCTGCCCGCG CCGCGCGAAG GCTTTTACCT GTGCCTGCGC
GCCTACATGC CACGGCCCGA ACTGCTGGAC GGCCGCTACG CCCTGCCCCC CATCGAACCA
GACCCGGAGA CCCCATGA
 
Protein sequence
MRHAMDLSAL AEEAVIHTCP LYEMRRMRAA TSPRRNAAGE AAPAPLRWCN QFVHARQLLR 
AGTSRVVTPN NDTLYTNAWL DLGAGPLVID VPDTAGRYYV LGLLDFFTNP FAHLGQRLTG
TAARSFLVTP PGWQGALPPP FDAPGAHIAA PTPWLWVIGR ILVDGVHDLP AVHALQDGFA
VRPLADWQAG TPSQARAFDP DCDPQAPPNA EHYAAQVNAA LRDNPPPAGH AARVARFAAV
GLGAGLGAPD AQQQAALQRA LDSVLPRLRA ASTGRRLDSG WELPALVEGS FGDDFQARAE
IAFKYIGMLE SREAIYPLAW HDARGRPLDG SRRYRLRFAP GALPPVQAFW SLTLYGAHDC
MLVDNPIDRH AIGDRTPGLC PDSDGDGGLT IHISHAPPAS EEHRANWLPA PREGFYLCLR
AYMPRPELLD GRYALPPIEP DPETP