Gene Daci_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1373 
Symbol 
ID5746928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1527979 
End bp1529232 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content71% 
IMG OID641296452 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001562402 
Protein GI160896820 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2015] Alkyl sulfatase and related hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA GAGACGACGA CAAGCCCTTC TTGCTGGTGG GCACCGGCAG CGAAACCGTG 
GCGCCGGGCC TGCACATACT GCGCGGCCAG GGCCAGTCCT TCGTGGCCGA GACCGACGCG
GGCCTGGTGG TGATCGACGC CGGCCCCGGC GGCAAGGTCA GCCAGGACAT GATCGCCAGC
CTGCGCCAGC TCAGCGACGC GCCCGTGCAT GCGCTGTGCT ACAGCCACGG CCACATCGGC
TACAACGCGG GCGTGCCCGC CTGGCTGGAG CATGCGGCCG CGCGCGGAGA GCCTGTACCG
CGCCTCATCG CGCACCGCAA CCTGCCGCGC CGCCAGGCAC GCTACCGCGA GACCCGGGCG
CTGCAGCACC GCATGGCCGA GATCCAGTTC AACCGCAGCG CGGGCTTTTT CGAGCACCGG
CTGGACATGC ACGAGCCCAC CGAAACCTTC GACACGCGGC TGGAGATAGG CAGCGGGGAC
AGCCGCATCG AGCTGTTCTG GGCGCCGTCC GAGACCGACG ACGCCATCGC GCTGTGGAGC
CCCGGCCAGC GCGTGCTGTA CGGCGGCGCG GCGCTGCTGG ACTCCATCCC CAACATCGGC
ACGCCGTTTC GCACGCTGCG CGACACCGTG CGCTGGGCCG ACACGCTGCA GGCCATGGCC
GCGCTGCGCC CGCTCAAGGC CGTGCGCGAG TTCGGTCCCG TGATCGAGGG CGAGCAGGCC
GTGCAGCAGG TGCTGCTGCA CACCGCACAG GCGCTGCGCT GGCTGCGCGC CGAAGTCGTG
CGCCTGATGA ACGAGGGCCT GAACGAGCAG CAGGTGCTCG CGGCCATGGA CTATCCGCAG
GAACTGTTCG GCGTGGAGTG GATGAAGCCC ACCTATGGCG ACCCCAGCTA CATCGTGCGC
GACATCTACC GCTCGGAAAA CGGCTGGTGG GACCGCAACC CGACCACGCT GCACCCGGCC
CCGCCCGAGA CTGCGGGCGC CGCCATTGCC CAGGCCATCA CCGACAAGCC CGGCCTGGTG
GCCAGCGCCC AGGCGCTGGC CGACGCGGGC CAGTGGCAGC TGGCCCTGCA TGTGATCGAC
GTGCTGGCAA CGGCGGCGGG CGACGCGCCC GAGATCGGCC AGGCCCGCAG CCTCAAGGCC
GCCTGGCTGC GCGAGCGTGC GCGCGAGGTG GACAGCTATG TCTCGCGCAA CCTCTACCGC
GTGGGGGCCG ACATGATCGA GCAGGGCCGG CAGGCGCGCC TGGGGCTGCG CTGA
 
Protein sequence
MNARDDDKPF LLVGTGSETV APGLHILRGQ GQSFVAETDA GLVVIDAGPG GKVSQDMIAS 
LRQLSDAPVH ALCYSHGHIG YNAGVPAWLE HAAARGEPVP RLIAHRNLPR RQARYRETRA
LQHRMAEIQF NRSAGFFEHR LDMHEPTETF DTRLEIGSGD SRIELFWAPS ETDDAIALWS
PGQRVLYGGA ALLDSIPNIG TPFRTLRDTV RWADTLQAMA ALRPLKAVRE FGPVIEGEQA
VQQVLLHTAQ ALRWLRAEVV RLMNEGLNEQ QVLAAMDYPQ ELFGVEWMKP TYGDPSYIVR
DIYRSENGWW DRNPTTLHPA PPETAGAAIA QAITDKPGLV ASAQALADAG QWQLALHVID
VLATAAGDAP EIGQARSLKA AWLRERAREV DSYVSRNLYR VGADMIEQGR QARLGLR