Gene Daci_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1367 
Symbol 
ID5746922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1521778 
End bp1522515 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID641296446 
ProductABC transporter related 
Protein accessionYP_001562396 
Protein GI160896814 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.769758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC TCAAGAACGT TTCCAAGTGG TACGGCAGCT TCCAGGTGCT GACCGACTGC 
TCCACCAACA TCCAGAAGGG TGAGGTCGTG GTGGTCTGCG GCCCTTCGGG CTCGGGCAAG
TCCACGCTGA TCAAGACCAT CAACGCGCTG GAACCCTTCC AGAAGGGCGA GATCTTCGTG
GACGGCGTGG CCGTGCACGA TCCCAAGACC AACCTGCCCC AGCTGCGCAG CCGCGTGGGC
ATGGTGTTCC AGCACTTCGA GCTGTTCCCG CACCTGTCGG TGACCGAGAA CCTGACCATC
GCCCAGATCA AGGTGCTGGG TCGCAGTCCG GACGATGCCA AGAAGCGCGG CCTCAAGATG
CTGGACCGCG TGGGCCTGAC GGCGCACAAG GACAAGTTCC CGGGCCAGCT GTCGGGTGGC
CAGCAGCAGC GCGTGGCCAT TGCGCGCGCG CTGTCCATGG ACCCCATCGT GATGCTGTTC
GACGAACCCA CCTCCGCGCT GGACCCCGAA ATGGTCGGCG AAGTGCTGGA CGTGATGATC
GGCCTGGCCA ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTTGCGCGC
AAGGTGGCCA GCCGCGTGAT CTTCATGGAC GTGGGCGGCA AGATCCTGGA GGACTGCTCC
AAGGACGAAT TCTTCGGCAA CCCGGAAGCG CGCCAGCCCC GGACCAAGGA ATTCCTCAAC
AAGATCCTGC AGCACTGA
 
Protein sequence
MIELKNVSKW YGSFQVLTDC STNIQKGEVV VVCGPSGSGK STLIKTINAL EPFQKGEIFV 
DGVAVHDPKT NLPQLRSRVG MVFQHFELFP HLSVTENLTI AQIKVLGRSP DDAKKRGLKM
LDRVGLTAHK DKFPGQLSGG QQQRVAIARA LSMDPIVMLF DEPTSALDPE MVGEVLDVMI
GLANEGMTMM CVTHEMGFAR KVASRVIFMD VGGKILEDCS KDEFFGNPEA RQPRTKEFLN
KILQH