Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1367 |
Symbol | |
ID | 5746922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1521778 |
End bp | 1522515 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641296446 |
Product | ABC transporter related |
Protein accession | YP_001562396 |
Protein GI | 160896814 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.769758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAAC TCAAGAACGT TTCCAAGTGG TACGGCAGCT TCCAGGTGCT GACCGACTGC TCCACCAACA TCCAGAAGGG TGAGGTCGTG GTGGTCTGCG GCCCTTCGGG CTCGGGCAAG TCCACGCTGA TCAAGACCAT CAACGCGCTG GAACCCTTCC AGAAGGGCGA GATCTTCGTG GACGGCGTGG CCGTGCACGA TCCCAAGACC AACCTGCCCC AGCTGCGCAG CCGCGTGGGC ATGGTGTTCC AGCACTTCGA GCTGTTCCCG CACCTGTCGG TGACCGAGAA CCTGACCATC GCCCAGATCA AGGTGCTGGG TCGCAGTCCG GACGATGCCA AGAAGCGCGG CCTCAAGATG CTGGACCGCG TGGGCCTGAC GGCGCACAAG GACAAGTTCC CGGGCCAGCT GTCGGGTGGC CAGCAGCAGC GCGTGGCCAT TGCGCGCGCG CTGTCCATGG ACCCCATCGT GATGCTGTTC GACGAACCCA CCTCCGCGCT GGACCCCGAA ATGGTCGGCG AAGTGCTGGA CGTGATGATC GGCCTGGCCA ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTTGCGCGC AAGGTGGCCA GCCGCGTGAT CTTCATGGAC GTGGGCGGCA AGATCCTGGA GGACTGCTCC AAGGACGAAT TCTTCGGCAA CCCGGAAGCG CGCCAGCCCC GGACCAAGGA ATTCCTCAAC AAGATCCTGC AGCACTGA
|
Protein sequence | MIELKNVSKW YGSFQVLTDC STNIQKGEVV VVCGPSGSGK STLIKTINAL EPFQKGEIFV DGVAVHDPKT NLPQLRSRVG MVFQHFELFP HLSVTENLTI AQIKVLGRSP DDAKKRGLKM LDRVGLTAHK DKFPGQLSGG QQQRVAIARA LSMDPIVMLF DEPTSALDPE MVGEVLDVMI GLANEGMTMM CVTHEMGFAR KVASRVIFMD VGGKILEDCS KDEFFGNPEA RQPRTKEFLN KILQH
|
| |