| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1366 |
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| Symbol | |
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| ID | 5746921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1520956 |
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| End bp | 1521627 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641296445 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001562395 |
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| Protein GI | 160896813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCTGC AAATCGACTG GTCGTTCTTC ACCTGGGACC TGTTCAGCAA CTTCGTGCTG
AAGGGCCTGT ACTTCAGCCT GACGCTGACC GTCATCGCCA CCATCGGCGG CGTGCTCTTC
GGTACCGTGC TGGCGCTGAT GCGCCTGTCC GGCAAGAAGT GGCTTGATGT GCCCGCCACG
CTCTACGTCA ACGGCATGCG CTCCGTGCCG CTGGTGATGG TGATCCTGTG GTTCTTCCTG
CTGATGCCGC TGATCATCGG TCGGCCCATC GGCGCCGAGG TCTCGGCCAT CATCACCTTC
ATCGCCTTCG AGGCGGCCTA CTTCAGCGAG ATCATGCGCG CGGGCATCCA GTCCATCCCG
CGCGGCCAGG TCTCCGCGGG CCAGGCCATG GGCATGACCT ACGGCCAGAA CATGCGCCTC
GTGGTCCTGC CCCAGGCCTT CCGCAACATG CTGCCGGTGC TGCTCACGCA GACCATCATC
CTGTTCCAGG ACACCTCGCT GGTCTATGCC ATCGGTGCCT ACGACATGCT CAAGGGCTTC
GAAGTGGCGG GCAAGAACTA TGGCCGTCCC ATCGAATCCT ATCTGGCCGC TGGCGTGACC
TACTTCGTGC TGTGCTACTC GCTCTCGTGG GCAGTCAAGC GCCTGCACAA AAAGATTGCC
ATCATTCGAT GA
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| Protein sequence | MNLQIDWSFF TWDLFSNFVL KGLYFSLTLT VIATIGGVLF GTVLALMRLS GKKWLDVPAT
LYVNGMRSVP LVMVILWFFL LMPLIIGRPI GAEVSAIITF IAFEAAYFSE IMRAGIQSIP
RGQVSAGQAM GMTYGQNMRL VVLPQAFRNM LPVLLTQTII LFQDTSLVYA IGAYDMLKGF
EVAGKNYGRP IESYLAAGVT YFVLCYSLSW AVKRLHKKIA IIR
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