Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1362 |
Symbol | |
ID | 5746917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1516939 |
End bp | 1517484 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641296441 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001562391 |
Protein GI | 160896809 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCC CTCCCACCGA AAACGGCGCC GCTGAGACGC CTTCGCAGCC GGACGAGCCG CGTTCGCTGC GCATCGAGGA CTGGCTCACC GTGGTGATCA TGGCCCTGCT GGCCCTGATC ACCTTCGCCA ATGTGCTGGT GCGCTACTTC ACCTCCTCCT CCTTCGCCTG GACCGAGGAA ATCTCGGTCT TCCTGATGAT CCTGCTGGCC ATGGTCGCGG GCTCGGCGGC CGTGGCGCGC AACGCCCATA TCCGCATCGA GTACTTCGCC GAAGGCGGCA GCGCCCTGCG CAGGAAGCGC CTGGCGCGCT TCGGCACGCT GATGGTGGCC CTGCTGTTCG CCGTGATCGC CGCACTGAGC GTGCGCGTGG TCTGGGACGA CTACCGTTTC GAGGAAACCT CGCCCGGCAT CGGCGTGCCG CAGTGGTGGT ATTCGATGTG GCTGCCGATT TGCTCGGCCC TGATCACGGT GCGCGCGCTG CAGCTGTTCC AGCGCCAGGG CCGCCCTGGC GCCTTCGATG ACAGCCCCGG GGAGAAGGCG CAATGA
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Protein sequence | MSSPPTENGA AETPSQPDEP RSLRIEDWLT VVIMALLALI TFANVLVRYF TSSSFAWTEE ISVFLMILLA MVAGSAAVAR NAHIRIEYFA EGGSALRRKR LARFGTLMVA LLFAVIAALS VRVVWDDYRF EETSPGIGVP QWWYSMWLPI CSALITVRAL QLFQRQGRPG AFDDSPGEKA Q
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