| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1361 |
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| Symbol | |
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| ID | 5746916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1515644 |
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| End bp | 1516942 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296440 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001562390 |
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| Protein GI | 160896808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAA CCCTGCTCTT CATCGCCTTC CTGGGCCTGA TGTTCCTGGG CGTGCCGATC
GGCGCGGCCC TGGGCCTGGC GGGCGCCGCC GCCATCGCGC TGGCCAGCCC CGACACGCAG
TGGTACGGCC TGCTGGCCGT GCCGCAGAAC TTCTACGCGG GCCTGGGCAA GTACCCGCTG
CTGGCGATTC CGATGTTCGT GCTCGTGGGC TCGATCTTCG ACCGCTCTGG CGTGGCGCTG
CGTCTGGTGA ACTTCGCCGT GGCCATCGTG GGCCGCGGCC CCGGCATGCT GCCCCTGGTG
GCGATTGCCG TGGCCATGTT CCTGGGCGGC ATCTCGGGCT CGGGCCCGGC CAATGCCGCC
GCCGTGGGCG GCGTGATGAT CGCGGCCATG AGCCGTGCCG GCTATCCGGG CAGCTTCTCG
GCCAGCGTGG TGGGCGCGGC CGCGGCCACC GACATCCTGA TCCCGCCGTC CGTGGCCTTC
ATCATCTACT CGGTGCTGGT GCCCGGCGCC TCGGTGCCGG CGCTGTTTGC GGCCGGCATG
ATCCCCGGCA TCCTGGCCGG CGTGGCGCTG ATCATTCCTG CCGTGTGGAT GTCGCGCAAG
CACAAGATGG GTGCGCTGGA GTCGTCCATG CCGCGCCCGC CGTTCTGGCG CAGCCTGCGC
GAGGCCTCCT GGGGCCTGGC CGCTCCGGTG CTGATCCTGG GCGGCATGCG CGCCGGCTGG
TTCACCCCCA CCGAGGCCGC CGTGGTGGCC GTGTTCTACG GCCTGTTCGT GGGCATGGTG
ATCCACCGCA CCATCACGCT GCGCGACCTC TACCCCATCC TGCGCGAGGC CGGCGAGCTG
TCGGCCGTGA TCCTGCTGGT GGTGTCGCTG GCCGGCATCT TCGCGTTCTC GCTGTCCACG
CTGGGCGTGA TCGATCCGGT GGCCAAGGCC ATCGTGGACT CGGGCCTGGG CGAGTACGGC
GTGATGGCGC TGCTGATCCT GCTGCTGATC ACCGTCGGCA TGTTCCTGGA CGGCATCTCC
ATCTTCCTGA TCTTCGTGCC GCTGCTGCTG CCGATCATGC AGCACTACAA CTGGGACCCG
GTGTGGTTCG GCGTCATCCT CACGCTCAAG GTGGCGCTGG GCCAGTTCAC GCCGCCGCTG
GCCGTGAACC TGATGGTGTC CTGCCGCATC GCGGGCGTGC GCATGGAGTC CACCGTGCGC
TGGGTCGGCC CCATGCTGCT GGCCATGTTC CTGGTGATGA TCGCAGTGAT CGCCTTCCCG
CAGCTGGCTC TCTGGCTCCC AGCACGCCTG GGCTACTGA
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| Protein sequence | MIATLLFIAF LGLMFLGVPI GAALGLAGAA AIALASPDTQ WYGLLAVPQN FYAGLGKYPL
LAIPMFVLVG SIFDRSGVAL RLVNFAVAIV GRGPGMLPLV AIAVAMFLGG ISGSGPANAA
AVGGVMIAAM SRAGYPGSFS ASVVGAAAAT DILIPPSVAF IIYSVLVPGA SVPALFAAGM
IPGILAGVAL IIPAVWMSRK HKMGALESSM PRPPFWRSLR EASWGLAAPV LILGGMRAGW
FTPTEAAVVA VFYGLFVGMV IHRTITLRDL YPILREAGEL SAVILLVVSL AGIFAFSLST
LGVIDPVAKA IVDSGLGEYG VMALLILLLI TVGMFLDGIS IFLIFVPLLL PIMQHYNWDP
VWFGVILTLK VALGQFTPPL AVNLMVSCRI AGVRMESTVR WVGPMLLAMF LVMIAVIAFP
QLALWLPARL GY
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