| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1360 |
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| Symbol | |
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| ID | 5746915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1514568 |
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| End bp | 1515611 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296439 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001562389 |
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| Protein GI | 160896807 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC GCACTTTCCT CGCCAGCGGC CTGGCCGCGG CTGCGGCCCT GGCCCTTTCG
TCCGCTCCCG CAGTGGCGCA GACTCCGGCC AAGTACAAGA GCGAGTACCG CATGTCGCTG
GTGCTGGGCA CGGCCTTTCC CTGGGGCAAG GGCGGCGAGA TCTGGGCCAA CAAGGTGCGC
GAGCGCACCA ACGGCCGCAT CAACATCAAG CTCTACCCGG GCGTGTCCCT GATCCAGGGC
GACCAGACGC GCGAATTCAG CGCGCTGCGC CAGGGCGTGA TCGACATGGC CGTGGGCTCC
ACGCTGAACT GGTCGCCCCA GATCAAGGAG CTGAACCTGT TCGCCCTGCC CTTCCTCATG
CCCGACTACG CCGCTGCCGA CGCACTCACG CATGGCGAGC CCGGCAAGCG CCTGTTCCAG
CGCCTGGAAA AGGCCGGCGT GGTGCCGCTG GCCTGGGGCG AGAACGGCTA CCGCGAGATC
AGCAACTCCA AGCACGCCAT CAAGACCCCT GCCGACCTCA AGGGCCTGAA GATCCGCGTC
GTGGGCTCGC CGCTGTTCCT GGACACCTTC ACCGCGCTGG GCGCCAACCC CACGCAGATG
AGCTGGGCCG ATGCCCAGCC CGCCATGGCC AGCGGCGCCG TGGACGGCCA GGAAAACCCC
GTCTCGGTCT ACATGGCCGC CAAGCTGCAG TCCGTGGGCC AGAAGCATCT GACGCTGTGG
GGCTACATCA ACGATCCGCT GATCTTCGTG GTCAACAAGG ACATCTGGGC CACCTGGACC
AAGGAAGACC AGGACATCGT GCGCCAGGCC GCCGTGGACG CCGCCAAGGA GCAGATCGTG
ATCGCGCGCA AGGGCATGAT CGAGGCCGAC AAGCCCCTGC TCAAGGACCT GGCCGCCAAC
GGCGTGACCG TGACCCAGCT CACGCCGGCC GAACGCGAAG CCTTCGTCAA GGCCACGCGC
CCCGTCTACG ACAAGTGGAA GCAGCAGGTC GGCACCGACC TGGTGGATGT GGCGGAGAAA
GCCATTGCCG CGCGAACTCG TTAG
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| Protein sequence | MKLRTFLASG LAAAAALALS SAPAVAQTPA KYKSEYRMSL VLGTAFPWGK GGEIWANKVR
ERTNGRINIK LYPGVSLIQG DQTREFSALR QGVIDMAVGS TLNWSPQIKE LNLFALPFLM
PDYAAADALT HGEPGKRLFQ RLEKAGVVPL AWGENGYREI SNSKHAIKTP ADLKGLKIRV
VGSPLFLDTF TALGANPTQM SWADAQPAMA SGAVDGQENP VSVYMAAKLQ SVGQKHLTLW
GYINDPLIFV VNKDIWATWT KEDQDIVRQA AVDAAKEQIV IARKGMIEAD KPLLKDLAAN
GVTVTQLTPA EREAFVKATR PVYDKWKQQV GTDLVDVAEK AIAARTR
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