Gene Daci_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1352 
Symbol 
ID5746907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1506763 
End bp1507854 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID641296431 
Productvanillate monooxygenase 
Protein accessionYP_001562381 
Protein GI160896799 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT TTCCCAAGAA CACCTGGTAC GTGGCCGCCA CGTCCGACGA GATCCAGGAC 
AAGCCGCTGG GCCGTCGCAT CTGCGGCGAG CGCATCGCGT TCTACCGCGC GCAGCACGGC
ATTGCCGCCG TGGAGGATTT CTGCCCGCAC CGCGGAGCGC CCCTGTCGCT GGGCTTTGTC
TGCGAGGGCA AACTGGTCTG CGGCTACCAC GGGCTGGAGA TGGGCTGCGA CGGCAAGACC
ATTGCCATGC CGGGCCAGCG CGTGCGCGGC TTCCCCGAGA TCCGCAGCTA TCCCGTCGAG
GAGCGCCACG GCTTCATCTG GGTCTGGCCC GGCGACAAGG CGCTGGCCGA TGCCGCCCTG
ATTCCGAAGC TGCCCTGGCA CGACAACCCC GAATGGGCCT ACGGCGGCGG CATGTTCCAC
ATCCAGGCCG ACTACCGGCT GATGATCGAC AACCTCATGG ACCTGACGCA CGAGACCTAT
GTGCACGCCA GCTCCATCGG CCAGGCCGAG ATCGACGAGA CGCCCTGCAA GACCGAGACG
CGCGGCGAGG GCGCCGATGT CGAGGTCGTC ACCAGCCGCT TCATGAACGA CATCCCCGCC
CCCCCGTTCT GGAAGATGGC GCTGCGCAGC AACGGCCTGG CCGACGATGT GCCCGTGGAC
CGCTGGCAGG TCTGCCGCTT CACCCCGCCC AGCCATGTGC TGATCGAGGT CGGCGTGGCC
CATGCAGGCC ACGGCGGCTA CGACGCGCCC GACGAACACA AGGTCTACAG CATGGTGGTG
GACTTCATCA CGCCGGAGAC CGAGGAATCC ATGTGGTACT TCTGGGGCAT GGCGCGCCGC
TTCAATCCGG GCGATGCCGA AGTCACCGAC CGCATCCGCG AGGGCCAGCA CAAGATCTTC
AGCGAAGACC TGCAGATGCT GGAGCTGCAG CAGCGCAACC TCAGTGCCCA CCCCGACCGC
AAGCTGCTCA AGCTCAACAT CGATGCGGGC GGCGTGCAGT CGCGCAAGGT CATCGACAAA
TGGATTGCGC AGGAGCAGCA GGCGGCGGCG GTGGCCGCAG CAGCGGCCCA GCCTGCCGCC
GCCGTGGCCT GA
 
Protein sequence
MSTFPKNTWY VAATSDEIQD KPLGRRICGE RIAFYRAQHG IAAVEDFCPH RGAPLSLGFV 
CEGKLVCGYH GLEMGCDGKT IAMPGQRVRG FPEIRSYPVE ERHGFIWVWP GDKALADAAL
IPKLPWHDNP EWAYGGGMFH IQADYRLMID NLMDLTHETY VHASSIGQAE IDETPCKTET
RGEGADVEVV TSRFMNDIPA PPFWKMALRS NGLADDVPVD RWQVCRFTPP SHVLIEVGVA
HAGHGGYDAP DEHKVYSMVV DFITPETEES MWYFWGMARR FNPGDAEVTD RIREGQHKIF
SEDLQMLELQ QRNLSAHPDR KLLKLNIDAG GVQSRKVIDK WIAQEQQAAA VAAAAAQPAA
AVA