Gene Daci_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1351 
Symbol 
ID5746906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1505910 
End bp1506668 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID641296430 
ProductGntR family transcriptional regulator 
Protein accessionYP_001562380 
Protein GI160896798 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC AGCTTGCCCC CGCCGCCTCC GAAGCGGAAA GCCACTCCCA GGTCATCAAG 
GCCCAGCTGC AACTGCGCGA GATGATTCTT GCGGGCGAAC TGCCCGCAGG CGAGCGCATC
GCCGAGCTGA CCGTGGTGCA GCGCCTGGGC ATCTCGCGCA CGCCGGTGCG CGCCGCGCTG
ATGCGGCTGG AGCAGGAAGG CCTGCTCGAA GCCATGGCCG GCGGGCGCGG CTACCGCGTG
CGGCTGTTCT CCGAGGCCGA TGTGGCCGAT GCCATCGAGC TGCGCGGCAC GCTGGAAGGC
CTGGCCGCGC GCTGGGCGGC CGAGCGCGGC GTGGCCGAGC CGCTGCTGGC CCAGGCCGGC
CGCTGCCTGG ACGCCATCGA CCGTGTGCTG GAGACGGCCG ACTGGGGCGA CGAGGCCTTC
TCGCGCTATG TGGCGCTGAA CTCCGAATTC CACGACCTGC TGCACTCCAT GGCCGGCAGC
AGCGTCATGC AGCGCGAGCT GGAGCGCGTG GTGCGCATGC CCTTCGCCTC GCCTTCGGGC
TTTGTGCTGG CGCGGGCCGA ATCCCCGCGT GCGCGCCACA GCCTGATGGT GGCCCAGGAC
CAGCACCGCC AGGTGCTGGA CGCCATTGCC GCGCGCGAGG GCGCCCGGGC CGAGGCGCTG
ATGAAAGAGC ACTCGCGCAT CGCGCGCCGC AACCTGCGCG AGGCCGTGAG CGAGCCCGGC
AGCCACGCGG TTCCTGGCGT GCAGTTGATC CGAGCCTGA
 
Protein sequence
MSPQLAPAAS EAESHSQVIK AQLQLREMIL AGELPAGERI AELTVVQRLG ISRTPVRAAL 
MRLEQEGLLE AMAGGRGYRV RLFSEADVAD AIELRGTLEG LAARWAAERG VAEPLLAQAG
RCLDAIDRVL ETADWGDEAF SRYVALNSEF HDLLHSMAGS SVMQRELERV VRMPFASPSG
FVLARAESPR ARHSLMVAQD QHRQVLDAIA AREGARAEAL MKEHSRIARR NLREAVSEPG
SHAVPGVQLI RA