Gene Daci_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1347 
Symbol 
ID5746902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1500641 
End bp1501306 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID641296426 
Producthypothetical protein 
Protein accessionYP_001562376 
Protein GI160896794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC AGAACCCGTT CTTTGGCAAG CGCGACAACG ATGCTTTCAC CTCCCGCAAC 
ACCCTGGGCA GCGGCACAGG CGCCGCCAGC ACGGGCGGCA GCCCTTCGGG AGCCGTCATG
CCCAGCTCCA GCGTGAGCAG CCCGGCATCC ACCCAGCGCC AGGCCTCGCC TGTGTCGCAG
GACTCTCCGG GCAGCAAGCT CACCGTGGGC CCCAACATCA AGCTCAAGGG CGTGGAGATC
ACCGATTGCG ACACGCTGGT GGTCGAAGGC ACGGTGGAGG CCACCATGGA CTCGCGCGTG
ATCCAGATCG CCGAGCAGGG CGCCTTCCAT GGCACGGCCG AGATCGATAT CGCCGAGATC
CATGGCGTGT TCGATGGCAC GCTGACCGTG CGCGAGAAGC TGGTCATCTA CGGCACGGGC
AAGGTCAGCG GCAAGATCCG CTACGGCAAG GTGGTGATTG AAGAGGGCGG CGAGCTCACG
GGCCAGATCG AGGCCGGTTC CTCGCCGCGT TCATCTTCGG GTTCGGCCGT GGCGTCCAGC
GCCTCCAGCC TGTCCTCTTC CTCGTCGGCC GTCTCCAGCG ACAGCGCCGC CAGCAGTTCC
GCTGCCCTGG CGGCGGCCAC CGCAGCGGCC TCGCTGCAGC CGCGCGTCAC GCCGTCGCTG
GCATGA
 
Protein sequence
MAVQNPFFGK RDNDAFTSRN TLGSGTGAAS TGGSPSGAVM PSSSVSSPAS TQRQASPVSQ 
DSPGSKLTVG PNIKLKGVEI TDCDTLVVEG TVEATMDSRV IQIAEQGAFH GTAEIDIAEI
HGVFDGTLTV REKLVIYGTG KVSGKIRYGK VVIEEGGELT GQIEAGSSPR SSSGSAVASS
ASSLSSSSSA VSSDSAASSS AALAAATAAA SLQPRVTPSL A