Gene Daci_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1319 
Symbol 
ID5746874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1469940 
End bp1470713 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID641296398 
Productglycosyl transferase family protein 
Protein accessionYP_001562348 
Protein GI160896766 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.362046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAT CGTTGGTCGT GTCGGTGGTG AGCCACGGAC ATGGCGCTCA TATACAGAGG 
CTGCTTGAAT GCCTGGCATC GGCGCGCCTT GCGCCGATGT CCCGCGTGGT GCTGACGCTC
AATATTCCCG AACCGGAGCC CCTGGCTCCA GCGACCGGCT GGCCTTTTGT CCTGGAGATC
CGGCGCAATG CGCAACCCCT GGGTTTTGGC TGCAACCACA ACCGGGCGCT GGCGAATGCC
CGGGAGGCGT TTGTCTGCGT GATCAATCCT GACGTGTACT GGGGAGCGCA GGAAGAGCCG
CTGCAAGAGC TTCTGGCGCT GGCGGCCCGG CCGGGGTTGG CCCTGGCCTA TCCCCCGCAG
ATCGGCGAAG ACGGCACGCT GCAGGATTTC GAGCGGGAGC TGCCATCTTT CTGGAATTTG
CTGCGACGCA AGCTGCACGG GCGTGTGGAG CAGCGTGTGG AATGGGTCAA TGCGGCCTGC
CTGGTGCTGG GCCGGGACAG CTGGATGCGG CTGCGTGGGT TTGACGAAGG TTTCTATATG
TATTGTGAGG ATGTGGATCT GTGCCTTCGC CTGCGGGTGC TGGGCGGAGA GCTTCGGCGC
GGTGAGTTGC CTGTCGTCCA TGCGGGCCAG AGGGCGAGCC GGCGCAGCCT GCGCCATGGC
GCATGGCACG TGGCCAGCCT GCTGCGGCTG TGGAGCCGTC CGGCCTACCG CAAGGCCCGA
GCCCTGCCGC AGGCAGCGCC CTCGCTGCGC AGCCTGCATG GGGAGCTATC GTGA
 
Protein sequence
MGSSLVVSVV SHGHGAHIQR LLECLASARL APMSRVVLTL NIPEPEPLAP ATGWPFVLEI 
RRNAQPLGFG CNHNRALANA REAFVCVINP DVYWGAQEEP LQELLALAAR PGLALAYPPQ
IGEDGTLQDF ERELPSFWNL LRRKLHGRVE QRVEWVNAAC LVLGRDSWMR LRGFDEGFYM
YCEDVDLCLR LRVLGGELRR GELPVVHAGQ RASRRSLRHG AWHVASLLRL WSRPAYRKAR
ALPQAAPSLR SLHGELS