Gene Daci_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1307 
Symbol 
ID5746862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1451737 
End bp1452312 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content63% 
IMG OID641296386 
Productgeneral secretion pathway protein M 
Protein accessionYP_001562336 
Protein GI160896754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.778587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0507451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC CAACGCCCGG TCTGTCGGGG CGGCAAATCC TGCTGCTGAC GCTGTCGGCG 
GCTGTATTGG TGCTTCCCCT GGTGCTGGTG GCCTTGTGGG TATACGGAAA GCACCAATGG
GCCGATGGGC AGCTCGCATC GCTGGAGCCG CGCTATGCGC GCGTGCTGGG CATGCAGCAG
CAGCAGACCG AGATCCAGGA GGCTCTGGAG CAACTGCAGG GCATAAGGGC CCAGCATGTA
TATCCCGGGG ATAGTGACAG CACCCAGACC GGCAACGGCG TGCAGCAGCA ACTGCGTTCC
GTGATGGACC GCGCGGGCCT GTCGGTGACC AGCAGCCAAG TCAAGGCGAC GTCGGAAGAG
GGACCCTACG AGCGTATCTC CGTTTCCATG ACCGCCGAAG GGCCATGGCC TGCCGTCCAG
ATGGCGCTAG CATCCGTGCG CGCCATACGG CCGACGATCT GGGTGGATGA CCTGCAGGTC
AACCTTCGCG GCAGTTTGCA AAACACCAAT CCTCAACTGG CGCCCGATCT CAGCGCCCAG
TTCACCGTCA GCATCTTCCG GAGCAAGGCG TCATGA
 
Protein sequence
MINPTPGLSG RQILLLTLSA AVLVLPLVLV ALWVYGKHQW ADGQLASLEP RYARVLGMQQ 
QQTEIQEALE QLQGIRAQHV YPGDSDSTQT GNGVQQQLRS VMDRAGLSVT SSQVKATSEE
GPYERISVSM TAEGPWPAVQ MALASVRAIR PTIWVDDLQV NLRGSLQNTN PQLAPDLSAQ
FTVSIFRSKA S