Gene Daci_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1298 
Symbol 
ID5746853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1443736 
End bp1444590 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID641296377 
Productpantothenate kinase 
Protein accessionYP_001562327 
Protein GI160896745 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.759253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0557063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CTATCCTCCG GAAAACTCCG ATAATCGCGC CCATGACTTT TTTGGCCATA 
GACATCGGCA ACACCCGCTT GAAATGGGCG ATGTACGACG CGCATCGGCC TGGCGCCGCT
TTGCTGGCGC ACGGCGCGGA GTTCCTGGAG CACATCGAGC ACCTGGCCGA AGGGCCGTGG
AGCGACCTGC CCACGCCTAC GCGCATGCTG GGCTGCGTGG TGGCCGGCGA CACGGCGCGC
CGGCGCGTGC ACGACCAGAT CGACATGATG CTGGGCTGGG ATTTCGAGCC GCAGTGGGCC
GTGCCCGGCG CGGCCGAGGC CGGAGTCACC AACGGCTACG ATTTCCCCTC GCGCCTGGGG
GCGGACCGCT GGGTGGCCAT GATCGGCGCG CGCCAGCACA TTCTGCAGCG CGGGCCAGAG
CGGCCCCTGA TCGTGGTCAT GGTCGGCACC GCCGTCACCG TGGATGCACT GGACCAGCAC
GGCCACTTCA TGGGCGGTCT GATCCTGCCG GGTCACGGCA TCATGCTGCG CGCCCTGGAA
AGCGGCACGG CCGGCCTGCA TGTGCCCACG GGTGCGGTCA CGCCATTCCC CACCAACACC
AGCGACGCGC TGACCAGTGG CGGCACCTAC GCCATCGCCG GGGCCGTGGA GCGCATGTAC
CAGCATCTGT ACATGCACTG CAGCATGGAG CCTGCCTGCG TCATGGCCGG CGGTGCAGGC
TGGAAGATGG TGCCCAGCAT GACGCGGCCC TTCGAGCTGG TGGACAACCT CATCTTCGAA
GGCCTGCTGG TCATGGCGCA GCGCCGCTGG GGCGATGCCA GCGGCCTGCC TGCCGACGCG
GTCAAAGCGG CCTGA
 
Protein sequence
MADAILRKTP IIAPMTFLAI DIGNTRLKWA MYDAHRPGAA LLAHGAEFLE HIEHLAEGPW 
SDLPTPTRML GCVVAGDTAR RRVHDQIDMM LGWDFEPQWA VPGAAEAGVT NGYDFPSRLG
ADRWVAMIGA RQHILQRGPE RPLIVVMVGT AVTVDALDQH GHFMGGLILP GHGIMLRALE
SGTAGLHVPT GAVTPFPTNT SDALTSGGTY AIAGAVERMY QHLYMHCSME PACVMAGGAG
WKMVPSMTRP FELVDNLIFE GLLVMAQRRW GDASGLPADA VKAA