Gene Daci_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1295 
Symbol 
ID5746850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1441218 
End bp1442192 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID641296374 
Producthypothetical protein 
Protein accessionYP_001562324 
Protein GI160896742 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.356601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.17145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC GCATTGTGCT GCAGGCCGCC GGCCTGGCAG CGGCCGCCCT GCTGGGCGCA 
GGAACCGTCC AGGCCCAGGC CTTTCCAACC AAGTCCATCA CCCTCGTGGT CCCCAACCCG
CCCGGCGGCG TGGTGGACAC GGCTGCACGC CTGGCGTCCG ACCCGCTGTC GCGCCTGCTG
GGGCAGTCGG TCGTGGTGGA CAACCGGGGC GGCGCCAGCG GCAACATTGC CTACCAGATG
GTGGCCCGGT CGCCCAAGGA CGGCTACACG CTGCTGGCCT CGTATTCGGC CTACCACGTG
GGCAATCCGG CACTGTTCCC CAAGCTGCCC TGGGCGCAGT CCGAGCTGGC GCCCGTGGGG
CTGATCGTGG CCGCCACCAA TGTGATCGCC GTTCATCCTT CGGTGCCAGC GAACAATCTG
CAGGAGTTCA TTGCCTATCT GCGCAAGAAC CCGGGCAAGG TCAATTACGC GTCGCAGGGC
AATGGCTCGC TGTCCCATGT GGGCACGGCC GTGTTCGCCC AGGTGACCCA GACCCAGATC
ACGCATGTGC CCTACAAGGG GTCCGGCCCG GCCATCCAGG ACGTGCTGGG CGGCCAAGTA
CAGATGTTCA TCACCACGCC GCCTTCGGTG CTGGGCCATG TGCAGACTGG CAAGCTCAGG
GCCCTGGCCG TGACCAGCAA GACGCGCCAT CCCATGCTGC CCGATGTGCC CACCACGGCC
GAAGCGGGCC TGCCGGGCTT CGAGCTGGAA GCCTGGGTCG GCCTGTTCGC GCCTGCGGGC
ACGCCGCCAG AGGCCATCGC CAGGCTGTCG GACGCGCTCA AGACCTCCCT GGAGTCGCCC
GACGTGCAAA AGCGCGCGGC CCTGCAGGGC GTGGAGCCGC GATTCCTTGG CCCGCAAGCG
CTGGCCGCCC TGGTCCAGCG CGAGACGGAC CACTGGGGCA AGGTGATCAA GGCCAACCAC
ATCACGATGG ATTGA
 
Protein sequence
MNRRIVLQAA GLAAAALLGA GTVQAQAFPT KSITLVVPNP PGGVVDTAAR LASDPLSRLL 
GQSVVVDNRG GASGNIAYQM VARSPKDGYT LLASYSAYHV GNPALFPKLP WAQSELAPVG
LIVAATNVIA VHPSVPANNL QEFIAYLRKN PGKVNYASQG NGSLSHVGTA VFAQVTQTQI
THVPYKGSGP AIQDVLGGQV QMFITTPPSV LGHVQTGKLR ALAVTSKTRH PMLPDVPTTA
EAGLPGFELE AWVGLFAPAG TPPEAIARLS DALKTSLESP DVQKRAALQG VEPRFLGPQA
LAALVQRETD HWGKVIKANH ITMD