Gene Daci_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1286 
Symbol 
ID5746841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1431351 
End bp1432523 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID641296365 
Producthypothetical protein 
Protein accessionYP_001562315 
Protein GI160896733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CCTCCCCCCG TTCTTCTTCC ACTCCCGCCT CCGGCTCCGG CTCCTGGGAG 
GCGGCCGCCG CCGCGCCCGC CATGGTGCGC AAGCACCCCT GCCCCGAATG CGGCGCCAAC
CTCGAATGGA ATGCCCAGGC CCAGGCGCTC AAGTGCCCGT ACTGCGGCAC CACGGTGCCC
TGGAGCGAGG AAACGCGCGA GGAACTGGGC CGCGATGTGG TCGAGCAGGA CCTGGCCGAG
GCGCTGCGCA ACCCCAAGTC CGGCCGGGGC TGGGGTACGG AGGACCGCTA CGAGGTCCAG
TGCCAGAACT GCCGTGCCAT CTCGGTCTTC GTGAACCGCA CCGTGGCCCA GCGCTGCGAC
TTCTGCGGCT CCCCCTCCAT CGTCGCCCAT GAGGACCAGG GCGATGCCAT CACGCCGCAG
AGCATCCTGC CCTTCAAGAT CAGCGACGGG CAGATCCGCG ACCGCATCCG CCAGTGGTAC
GGCAGCCGCT GGTTCGCGCC CAACCGCCTG AAGTCCGCCG CGCTGACCGA CACTCTGCAC
GGCGTCTACC TGCCCTACTG GACCTTCGAC GCCCACGCCA GCGCCGACTG GCAGGCCGAG
GCGGGCTTCT ACTACTACAC CACCGAGTCC TACCGCGACA GCAACGGCAA TGTGCAGACG
CGCCAGGTGC GCCATGTGCG CTGGGAGCCG GCCGCGGGCA GCCTCGCCCA TTTCTTCGAC
GACGAGCTGG TGCCCGGCAC CGTAGGCGTG CACGCCAACC TGCTGCGCCA GGTGGAGCCC
TTTCCCACGA CCACCGACCT CAAGCCCTAC ACGCCCGAGT TCGTGCGCGG CTGGACCGTG
GAGCGCTACC AGATCGACCT GGGCAAGGCC GCCCAGGTCA ACGTGCAGGA CATGGACGAG
CAGCTGCGCG CCCTGTGCGC GCGCCAGGTG CCCGGCGACA CCTACCGCAA CCTGCAGATG
CAGCGCGAGT ACCAGGGCCG CACCTTCAAG CACATCCTCG TGCCGGTCTG GCTGGTAGGC
TACACCTACG GCAGCAAGAC CTTCCAGATC ATCGCCAACG GCTACACGGG CCAGATCGCG
GGCGAGCGCC CCTACAGCGC CCTCAAGATC ACGCTGGCCG TGCTGGCCAC GATCATGGTG
CTGGCGCTGC TGTGGGTGAT GTTCGGCAAG TAG
 
Protein sequence
MSAPSPRSSS TPASGSGSWE AAAAAPAMVR KHPCPECGAN LEWNAQAQAL KCPYCGTTVP 
WSEETREELG RDVVEQDLAE ALRNPKSGRG WGTEDRYEVQ CQNCRAISVF VNRTVAQRCD
FCGSPSIVAH EDQGDAITPQ SILPFKISDG QIRDRIRQWY GSRWFAPNRL KSAALTDTLH
GVYLPYWTFD AHASADWQAE AGFYYYTTES YRDSNGNVQT RQVRHVRWEP AAGSLAHFFD
DELVPGTVGV HANLLRQVEP FPTTTDLKPY TPEFVRGWTV ERYQIDLGKA AQVNVQDMDE
QLRALCARQV PGDTYRNLQM QREYQGRTFK HILVPVWLVG YTYGSKTFQI IANGYTGQIA
GERPYSALKI TLAVLATIMV LALLWVMFGK