Gene Daci_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1283 
Symbol 
ID5746838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1427339 
End bp1428412 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content71% 
IMG OID641296362 
ProductABC transporter related 
Protein accessionYP_001562312 
Protein GI160896730 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TAGACCATAT CGCCAAGCGC TACCGCGAGC AGCAGGTGCT GCGCGGCATT 
GACCTGAACG TGGAGGCGGG CGAGTTCGTC AGCCTGCTCG GCCCTTCGGG CTGCGGCAAG
ACCACGCTGC TGCGCATCGT CTGCGGCATC GACATGCCTG ACGAGGGCAG GGTGCTGTTC
CAGGGCGATG ACATCACGCG CTGGCCGGCC GCACGCCGTG GCTTTGGCGT GGTGTTCCAG
AGCTATGCGC TGTTTCCCAA TCTCACGGCC GCGCAGAACG TGGCCTTCGG GCTGAACGGG
CAGCCTGCGG CGCAGGCGCG CGAGCGTGTG GCCGAGATGC TGTCCCTGGT GGGCCTGGGC
GCGCAGGCCC AGCGCTACCC CGCCCAGCTG TCCGGCGGCC AGCAGCAGCG CGTGGCCCTG
GCCCGTGCGC TGGCGCCCCG GCCGCGCCTG CTGCTGCTCG ACGAGCCGCT GTCCGCGCTC
GATGCCCAGG TGCGCACCGA GCTGCGCAGC GAGATCCGCC AGCTGCAGCG CCAGCTGGGG
ATTGCCTCCA TCATGGTCAC GCACGACCAG GAAGAGGCCT TGTCCATGGC CGACCGCGTG
GTGCTCATGC ACCAGGGCCG CATCGAGCAG CAGGGCTCGC CCGAGCAGCT CTATGCCCGG
CCCGTGAGCC AGTTCGCGGC CGGCTTCGTG GGCCGCATGA ACCTGCTGCC GGCCACGGCC
CAATCGGCGG ACCAGGTGCG CATCGGCGAG GCCAGCCTGC GCTGTGCGCT GGCCGGTTTC
GAGCCTGGCG CTGCCCTGCT GGTGGGCGTG CGGCCCGAGA GCGTGGTGCT GCACCCGGCC
CAGCCCACGG CATTGGCCAA CCTGTTCCGC GCCCGCGTGG TGGAGACTTC CTTCCTGGGA
TCGATGGCCC TGGTGCGCCT GTTCAGCCCC ACGCTGCAAT GCCAGGTTGA CGCCCAGTGG
CCCCTGCGCC ACGACGTGGG CCTGCCCGAC TGGCTGCAGG GCGAGGTGCT GATGGAGCTG
CCCGCCGCCG CGCTGCAGCC GCTGGCGGCG CCCGACGTGA GGAAGGCCGC ATGA
 
Protein sequence
MLRIDHIAKR YREQQVLRGI DLNVEAGEFV SLLGPSGCGK TTLLRIVCGI DMPDEGRVLF 
QGDDITRWPA ARRGFGVVFQ SYALFPNLTA AQNVAFGLNG QPAAQARERV AEMLSLVGLG
AQAQRYPAQL SGGQQQRVAL ARALAPRPRL LLLDEPLSAL DAQVRTELRS EIRQLQRQLG
IASIMVTHDQ EEALSMADRV VLMHQGRIEQ QGSPEQLYAR PVSQFAAGFV GRMNLLPATA
QSADQVRIGE ASLRCALAGF EPGAALLVGV RPESVVLHPA QPTALANLFR ARVVETSFLG
SMALVRLFSP TLQCQVDAQW PLRHDVGLPD WLQGEVLMEL PAAALQPLAA PDVRKAA