| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1276 |
|---|
| Symbol | |
|---|
| ID | 5746831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1420390 |
|---|
| End bp | 1421292 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296355 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_001562305 |
|---|
| Protein GI | 160896723 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC TGCTGCTGGG CCGCAATGGC CAGGTGGGCT GGGAGCTGCA GCGCAGCCTG
GCGCCACTGG GCGAACTGAT TGCGCTGGAC CGCCAGGGCG ACGCCGGTGG CCAGGGCCTG
TGCGGCGATC TCTCGCGCCT CGATGAGCTT GCACGCACCG TGCGCGCTCT GCGCCCCGAT
GTCATCGTCA ATGCCGCCGC CCACACGGCC GTGGACAAGG CCGAAAGCGA GCCTGACCAG
GCGCGGCTGC TCAACGCGCT GGCTCCCCAG GTGCTGGCCC GCGAGGCGGC GCAGATCGGT
GCGCTGCTGG TGCACTACAG CACGGACTAT GTCTTCGACG GCAGCGGCAG CGCCGCGCGC
ACGGAGACCG AGGCCACGGC GCCGCTGTCC GTCTATGGCA GCAGCAAGCT CGAAGGCGAG
CAATTGATCC AGGCTTCGGG CTGCCGCCAC CTGATCTTTC GCACCAGCTG GGTCTATGCG
GCGCGCGGCG GCAACTTCGC CAAGACCATG CTGCGCCTGG CCCAGGAGCG TGAGGCGCTG
AGCGTGATCG ACGACCAATG GGGCGCACCG ACGGGCGCGG ACCTCATCGC CGACGTCACG
GCCCATGCCA TTCGCCAGCT GCAGCGCCAA CCCGGCGACC AGGGTCTGTA TCACCTGGTG
GCCGGTGGCG AGACCACCTG GCATGCCTAC GCCGACCATG TGATCGCCAA GGCGCGCGAA
CTCGCGCCCG AACACCCCTG GATGGTGCAG CGCATAGCTG CCGTGCCCAC CAGCGCCTTT
CCCACCCCGG CGCAGCGTCC GCACAATTCC CGCCTGAACA CCGAGCGGCT GCAGCAGACC
TTCGGCCTGC GCCTGCCCCA CTGGCAAGCC GGCGTGGACC GCATGCTGCA GGAAATCATC
TGA
|
|---|
| Protein sequence | MKLLLLGRNG QVGWELQRSL APLGELIALD RQGDAGGQGL CGDLSRLDEL ARTVRALRPD
VIVNAAAHTA VDKAESEPDQ ARLLNALAPQ VLAREAAQIG ALLVHYSTDY VFDGSGSAAR
TETEATAPLS VYGSSKLEGE QLIQASGCRH LIFRTSWVYA ARGGNFAKTM LRLAQEREAL
SVIDDQWGAP TGADLIADVT AHAIRQLQRQ PGDQGLYHLV AGGETTWHAY ADHVIAKARE
LAPEHPWMVQ RIAAVPTSAF PTPAQRPHNS RLNTERLQQT FGLRLPHWQA GVDRMLQEII
|
|---|
| |