Gene Daci_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1274 
Symbol 
ID5746829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1417935 
End bp1419158 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID641296353 
ProductBeta-ketoacyl synthase 
Protein accessionYP_001562303 
Protein GI160896721 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GTCGCGTAGT CATCACCGGC GCGGGCATTG TCTCGTGCAT CGGCAACGAC 
CTCGATACCG TGGAGACCTC GCTGCGCGAG GGCCGCACGG GCATCAAGGC CATGCCGAAG
TTCACCGAAC TGGGCATGCG CAGCCAGGTG GCCGGTGTGC CGGAGATCGA CGTCGAGGCA
AGGATCGATC GCAAGCAGCT GCGCTTCATG GGCGATGCGG CAGCCTATGC GCAGATCGCG
CTGGAAGATG CCATCGCCCA GGCGGGCCTG GCACCCGAGC AGGTCAGCCA TCCGCGCACG
GGCCTGATCA TGGGCTCGGG CGGCGGCTCG CCGGCCAACC AGATCGAGGC GGCTGACACA
TTGCGCGAGA AGGGCATTCG CCGCGTCGGT CCCTACCAGG TCACGCGCTG CATGAGCTCC
ACGGTGTCGG CCTGCCTGGC GACCAATTTC AAGGTCAAGG GCATCAACTA CTCCATCACC
TCGGCCTGCT CCACCTCGGC GCACTGCATC GGTGCGGCGG CACAGCAGAT TGCCTGGGGC
ATGCAGGACG TGATGTTTGC CGGTGGCGGC GAAGAGCTGT CCTGGGGCAT GGCCCTGCTG
TTCGACGGCA TGGGTGCCAT GTCCAGCAAG CACAACGACC AGCCCGAAAA GGCTTCGCGC
GCCTATGACG CCAACCGCGA CGGTTTCGTG ATCGCAGGCG GCGGCGGTGC CGTGGTGCTG
GAAAGCCTGG AGCACGCCCA GGCCCGGGGT GCGAACATCC TGGCCGAAGT CGTGGGCTTT
GGCGCCACCA GCGATGGCGA GGACATGGTC GCGCCCTCGG GCGACGGAGC CATCGCCTGC
ATGCAGCAGG CCCTTGAAGG CATCGAAGGC GGCGTGGACT ACATCAACAC CCACGGCACC
TCCACGCCTG TGGGCGACAT GCAGGAAGTG CGCGCCATGC GCGCGCTGTT CGGCGACCAG
GTGCCGCCGT TCTCCTCCAC CAAGTCGCTG ACCGGCCACT CGCTGGGCGC GACCGGCGTG
CAGGAAGCCA TCTACTGCAT GATCATGATG AACAAGGGCT TCATCGCAGG CTCGGTCAAC
GTGGACACGC CCGATCCAGC ACTGGGCGAC ATGCCCCTGG TCACCCGCAC GCGCGATGCC
CAGTTGAACA CCGTGCTGTC CAACAGCTTC GGCTTCGGTG GCACGAACGC CTCGCTGGTG
CTGCGCCGCT GGCAGGGCCA GTGA
 
Protein sequence
MTKRRVVITG AGIVSCIGND LDTVETSLRE GRTGIKAMPK FTELGMRSQV AGVPEIDVEA 
RIDRKQLRFM GDAAAYAQIA LEDAIAQAGL APEQVSHPRT GLIMGSGGGS PANQIEAADT
LREKGIRRVG PYQVTRCMSS TVSACLATNF KVKGINYSIT SACSTSAHCI GAAAQQIAWG
MQDVMFAGGG EELSWGMALL FDGMGAMSSK HNDQPEKASR AYDANRDGFV IAGGGGAVVL
ESLEHAQARG ANILAEVVGF GATSDGEDMV APSGDGAIAC MQQALEGIEG GVDYINTHGT
STPVGDMQEV RAMRALFGDQ VPPFSSTKSL TGHSLGATGV QEAIYCMIMM NKGFIAGSVN
VDTPDPALGD MPLVTRTRDA QLNTVLSNSF GFGGTNASLV LRRWQGQ