Gene Daci_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1268 
Symbol 
ID5746823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1411718 
End bp1412800 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID641296347 
Producthypothetical protein 
Protein accessionYP_001562297 
Protein GI160896715 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC GCCACGACGC CAACCGCGCC ATGTCACGCC ATGCCCGTGC GCCTGCGCCA 
GCCGGCCCGC AGCCGTCGGC CCGGTTGGCG CGGCGCAGCC TGCTGGCAGC ACTGGCCGCC
CTGCCCTGGC TGCCTGCGGC GGCGCAGGCC CAGCAGCCCT CCGCCGCCCA GACGCGCGAT
GCGAAGTCCG ACTCCCTGAC CCTGATCGTT CCCTATGCGG CCGGCGGCCC GCTGGACCGC
ACGGCACGGC CGCTGGTCGA GGCCAGCACC GCGAAGCTGG GAGCCATCCA AATCCTCTAT
GTGCCGGGCG ACGGCGGCGC CAAGGGCTCC AACATGGTCG CCCAGGCCAC GGCCCAGGAC
CGCTTGCTGC TGATGGGCGC GGCCGCCACC CATGCCGTGC TGCCCTGGCT TCAGCCCCAG
CTGGGCTACG ACCCGCTGCG CGACTTCCAG CCGCTGGTGC TGGTGGCGCG CATGCCCAAT
GTGCTGGTCA TGCGCAGCGA TCTGGCACGC CAGTGGCGCA TACGCACGCC GCTGGACCTG
CAGCGCTTTC TTGCCAAGCA CCGCCAGCCG CTGCGCTATG CCTCGGGCGG GCCGGGCAGC
AGCGGCCACC TGTCGGGCGA GATGTACCAG ATGCTCACGC GGCTGCCGCT GCTGCACCTG
CCCTTCGGCG GCACGCAGCC GGCACTGTCG GCCCTGCTCG ACGGCTCGGC CGACCTGCTG
TTCGACAGCC TGGCGTCTTC GCTGCCGCAC ATCCGCGCAG GGCGGCTGCA GGCCCTGGCC
GTGACCACGC TGGAGCGCGC GCCCCTGCTG CCCGAGGTGC CCAGCCTCAA CGACACGGTG
CAGGGCTTCA ACATGGCCAA CTGGTTCGGC CTGTTTGCAC CGGCCAGCTG GCCCGCGGAA
CAGGCGCAGC GCCATGCCGC CGCGTTCTCG CAGGCCATGC GCAGCCGCCC GGTGCAGGAC
ACCCTGTCCG CCATGGGCGC GCTGCCCGAA GAACTGCAAC TGCAGGAGTT CGCGCGCTTT
GTGCGTTCCG AGCACAGCAA ATACGGCCTG CTGGTACAGG CCGCCCGAAT CCGCCAGCTC
TGA
 
Protein sequence
MTPRHDANRA MSRHARAPAP AGPQPSARLA RRSLLAALAA LPWLPAAAQA QQPSAAQTRD 
AKSDSLTLIV PYAAGGPLDR TARPLVEAST AKLGAIQILY VPGDGGAKGS NMVAQATAQD
RLLLMGAAAT HAVLPWLQPQ LGYDPLRDFQ PLVLVARMPN VLVMRSDLAR QWRIRTPLDL
QRFLAKHRQP LRYASGGPGS SGHLSGEMYQ MLTRLPLLHL PFGGTQPALS ALLDGSADLL
FDSLASSLPH IRAGRLQALA VTTLERAPLL PEVPSLNDTV QGFNMANWFG LFAPASWPAE
QAQRHAAAFS QAMRSRPVQD TLSAMGALPE ELQLQEFARF VRSEHSKYGL LVQAARIRQL