| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1243 |
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| Symbol | |
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| ID | 5746798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1386737 |
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| End bp | 1388464 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296322 |
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| Product | ABC transporter related |
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| Protein accession | YP_001562272 |
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| Protein GI | 160896690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA CACAAGAATC CGGGCAGCCC CCTGCACAGC CTGCGGTGCT GAGCGTTCGC
GGCCTGTCCG TCACCTTCGA CACCTACAAG GGCCCCGTGC AGGTGCTGGA CGATGTGAGC
TTCGACATCG CGCCCGGCGA GATCCTGGGC GTGGTGGGCG AGTCGGGCGC GGGCAAGTCC
ATGACGGGCG CCGCCGTGAT CGGCCTGATC GAGCCGCCGG GCCGCATCTC GGCCGGCACG
GTGCAGCTGC GCGGCGAGCG CATCGACACG CTGCGCGGCG AGGACCTGCG GCGCATACGC
GGCCGGCGCA TAGGCTCCAT CTTCCAGGAC CCGCTGACCA GCCTGAACCC GGTCTACACC
GTGGGCTGGC ACCTGGTGGA GACCATCCGC ACGCATCTGC CCGTCTCCGA GAAGGAGGCC
GAAGCCCGCG CGCTGGCCCT GCTCGAAGAG GTGGAGATCC CGCAGGCGCG CGAGCGCATG
GCCCAGTATC CGCACCAGTT CTCGGGCGGC ATGCGCCAGC GCGTGGCCAT CGCCCTGGCG
CTGTGCGCCG AGCCCGAGCT CATCATTGCC GACGAGCCCA CCACGGCGCT GGACGTGTCC
GTGCAGGCGC AGATCATTGC CCTGCTGCGC CGTGTGTGCA AGGAGCGCGG CGCGGCCGCC
ATGCTGATCA CGCACGATAT GGGCGTGATC GCCGAGACGG CCGACCGCGT CATGGTCATG
TACCAGGGCC GCGTGCTGGA AACCGGCCCC GTGCGCCAGG TGCTGGACGC ACCGCAGCAG
CCCTACACCC AGGTGCTGAT GGGCGCCATT CCCAGCGTGC ACCACCGCGT GCAGCGCCTG
CCCGTGCCCG AGGTGGGCGG CGGCCCGGCC GCGCCCGCCG TGCCCTGGCA GCCCAGGGCC
GGAGCGCAGG AGCCCGCGGC TGCCCTGCTG GAGGTCAGGG ATCTGTGCAA GGAGTTCGAC
CTGTCCAGCG GCTGGCTGGC CCGTCTGCTG GCGCGCGAGG ACAAAAAAAT CCTCAAGGCC
GTGGACGGCG TCGGCTTTTC GATCCGCAGG GGCTCCACCT TCGGCCTGGT CGGCGAGTCC
GGCTCGGGCA AATCCACGGT GGCGCGCATG GTGGCCGGGC TGACGCCCCC GACCAGCGGC
ACCGTGCTGT TCGACGGCGT GGACAAGTGG AGCCCGGCCG CCCAGACCGT GGCCATGCGC
CGGCGCTTCC AGATGATCTT CCAGGACCCG TATGCCAGCC TGAACCCGCG CTGGACCGTG
CAGGAACTGA TTGCCGAGCC CCTGCAGGTG CTGGCCCTGA CGGCCGGCAA GGACGAGACG
GCCGAGCGCG TGCAGGAGGC GCTGCGCCGC GTGCGCATGA AGCCCGACGA TGCGCGCAAG
TACCCGCACC AGTTCTCGGG CGGGCAGCGC CAGCGCATCG CCATCGCGCG CGCCCTGGCC
AGCCGGCCCG AATTCATCAT CTGCGACGAG CCCACCTCGG CGCTGGACGT CTCGGTCCAG
GCCCAGGTGC TCAACCTCAT GCGCGACCTG CAGGAGGAGT TCGGCCTGAC CTATCTGCTG
ATCAGCCACA ACCTGGCTGT GATCCGCCAC ATGTGCGACG ACATCGGCGT CATGCAGCGC
GGCCGCTTGG TCGAGACCGG CGAGGCCGGC GCCGTGCTCG ATGCACCGCA GCATGCATAC
ACGCGCGCGC TGATGGCTGC CGTGCCTGAT ATGGAGCATG TGCACTGA
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| Protein sequence | MSTTQESGQP PAQPAVLSVR GLSVTFDTYK GPVQVLDDVS FDIAPGEILG VVGESGAGKS
MTGAAVIGLI EPPGRISAGT VQLRGERIDT LRGEDLRRIR GRRIGSIFQD PLTSLNPVYT
VGWHLVETIR THLPVSEKEA EARALALLEE VEIPQARERM AQYPHQFSGG MRQRVAIALA
LCAEPELIIA DEPTTALDVS VQAQIIALLR RVCKERGAAA MLITHDMGVI AETADRVMVM
YQGRVLETGP VRQVLDAPQQ PYTQVLMGAI PSVHHRVQRL PVPEVGGGPA APAVPWQPRA
GAQEPAAALL EVRDLCKEFD LSSGWLARLL AREDKKILKA VDGVGFSIRR GSTFGLVGES
GSGKSTVARM VAGLTPPTSG TVLFDGVDKW SPAAQTVAMR RRFQMIFQDP YASLNPRWTV
QELIAEPLQV LALTAGKDET AERVQEALRR VRMKPDDARK YPHQFSGGQR QRIAIARALA
SRPEFIICDE PTSALDVSVQ AQVLNLMRDL QEEFGLTYLL ISHNLAVIRH MCDDIGVMQR
GRLVETGEAG AVLDAPQHAY TRALMAAVPD MEHVH
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