| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1241 |
|---|
| Symbol | |
|---|
| ID | 5746796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1384840 |
|---|
| End bp | 1385805 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641296320 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001562270 |
|---|
| Protein GI | 160896688 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTCC ATCTGCTGCG CCGGCTGGGC CAGTCCGCCC TGGTCCTGCT GGCCGTTTCC
TTTGTCTCGT TCATGGTGTT CCGCCATATC GGCGATCCCA CGATCAGCCT GCTGGGCGAG
GACGCGACGG TTGCCGAGCG CGAGGCGCTG ACGGAAAGCC TGGGCTTCAA CAAGCCCGTG
CCCCTGCAGT ACCTGGGCTA CGTGGGCAAG GTGCTGCAGG GCGACCTGGG CATCTCCTAC
CGGCTCAAGC GCCCCGTGAC CGAGATCATT GCCGAGCGCC TGCCCGCCAC GCTGGAGCTG
GCGATGACGG CGGCTCTGTT CGCCCTGGTC ATCGGCGTGG CGCTGGGCGT GTACACGGCC
ATACGGCGCG AGGGCTGGCT GAGCCGCTCG ATCATGACGG TGTCGCTGGT GGGCGTGTCC
CTGCCCACCT TCCTGATCGG CATCGCCCTG ATCTACCTGT TTGCCGTGGA GCTGCGCTGG
CTGCCGTCCT TCGGGCGCGG CGAGACGGTG AAGCTGGGCG GCTGGGAGAC CGGGCTGCTG
ACGGCCTCGG GCTGGTCGGC GCTGATCCTG CCGGCCATCA CGCTGGGCTT CTACAACATG
ACGCTGATCA TGCGCCTGGT GCGCGCCGAG ATGCTGGAGG TGCTGCGCGC CGACTACATG
CGCTTCGGCC GTGCGCGCGG GCTGCGCGAG CGCGACCTGT ACTTCGGCCA TGCGCTGCGC
AATACCCTGA TTCCCGTGAT CACCATCGCG GGCCTGCAGA TCGGCTCGCT GATCGCCTTT
GCCATCGTCA CCGAGACCGT GTTCCAGTGG CCCGGCGTGG GCCTGCTGTT CATCTCCTCC
ATCCAGGGCG TGGACGTGCC GCTGATCGCC GCCTACCTGA TGTTCATCGC GCTGCTGTAC
GTGGGCATCA ACCTGCTCGT CGATTTCCTG TACGTGATCG TGGATCCCCG CTTGAGAAAC
CGATGA
|
|---|
| Protein sequence | MLVHLLRRLG QSALVLLAVS FVSFMVFRHI GDPTISLLGE DATVAEREAL TESLGFNKPV
PLQYLGYVGK VLQGDLGISY RLKRPVTEII AERLPATLEL AMTAALFALV IGVALGVYTA
IRREGWLSRS IMTVSLVGVS LPTFLIGIAL IYLFAVELRW LPSFGRGETV KLGGWETGLL
TASGWSALIL PAITLGFYNM TLIMRLVRAE MLEVLRADYM RFGRARGLRE RDLYFGHALR
NTLIPVITIA GLQIGSLIAF AIVTETVFQW PGVGLLFISS IQGVDVPLIA AYLMFIALLY
VGINLLVDFL YVIVDPRLRN R
|
|---|
| |