Gene Daci_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1238 
Symbol 
ID5746793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1381612 
End bp1382253 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641296317 
Productphosphoglycerate mutase 
Protein accessionYP_001562267 
Protein GI160896685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.754918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA CGCGCATCAT TGCCATCCGC CACGGAGAAA CCGCCTGGAA TGTGGACGCC 
CGCATCCAGG GCCATCTGGA CATTCCTCTG AACGACATGG GACTTTGGCA GGCCGCCCAG
GCCGGCAAGG CCCTGGCGGG CGAGCCGGTG GCCGCCATCT ACAGCAGCGA CCTTCTGCGT
GCCTATGTCA CGGCCGAGGC CGTGGCCGCA AGCACGGGGG CGACGCTGAC GGCCGACAAG
GGCCTGCGCG AGCGCTGCTT CGGCAGGTTC GAGGGCCAGA CCTTCAACGA TATCGAGGCA
TCCCACCCGG AGGATGCGCT GCGCTGGCGC AAGCGAGATC CCGAGTTCGT GCCCGCAGGC
GGCGGCGAGT CGCTGCTGAT GCTGCGCGAC CGCATCTCGG CCACGGTGAA CCGGCTGGCC
AGTGGCCATC CCGGCGAGCA GATCGTGATC GTGGCGCATG GCGGCGTGAT GGATGTGCTC
TACCGCCTGG CCACGCACCA GGAAGTGCAG GCACCACGCA CCTGGGCGCT GGGCAACGCG
GCCATCAACC GCCTGCTGTG GACGCCCCAG GGCCTGGGCC TGGTCGGCTG GGGCGATGTG
CAGCACCTGG AAGGCGGTGC GCGCGACGAG GTTTTCAGCT AA
 
Protein sequence
MQATRIIAIR HGETAWNVDA RIQGHLDIPL NDMGLWQAAQ AGKALAGEPV AAIYSSDLLR 
AYVTAEAVAA STGATLTADK GLRERCFGRF EGQTFNDIEA SHPEDALRWR KRDPEFVPAG
GGESLLMLRD RISATVNRLA SGHPGEQIVI VAHGGVMDVL YRLATHQEVQ APRTWALGNA
AINRLLWTPQ GLGLVGWGDV QHLEGGARDE VFS