Gene Daci_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1237 
Symbol 
ID5746792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1380107 
End bp1381561 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content69% 
IMG OID641296316 
Producthypothetical protein 
Protein accessionYP_001562266 
Protein GI160896684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.78414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC GCATCATTGC GGCCGTCGTG GCTGCCTGCG CCGCCATGTC CGGCTGTGGC 
GACAAGCCGT CCGAGCAGCC CAGGACCGAC GCGCCTGAAC AACCCCAAAG CGTCGCCCCG
CCCGTGCCCG ACGTGGGCAG GCTGGAGACC GTCGAGGTCC AGGTCATCGG CCTGGGCCAG
TCCCCTGGCG AAGCCATGGC GCAGGCGCTG CAGATGGCGC TGCTGCAGGT CAATGGCGCC
GTGATCCAGT CCGCCTCGGT CACGGCCAGG TACGGCCTCG ACGTGGCGCT GGGACAGGAC
GCCGCCTCGC TGCGCGCCAG CGCCTTCGCC GAGGTGGTCA AGCAGAAGTC CGGTGGCGTC
ATCCAGTCGG TCCAGGTGGT GGATCTGGAG GAACCCAAGC CCTGGGCCAA GCGCTACAAG
TACACCATCA AGGCCAGCAT CTCCAAGTTC AAGCCTTCGG CCGAGATGCA GAAGATCAAG
GTCGTTGTGG GGCCGGTGCG CTTCGAGCAG GCCTCGCTGC CCATGGGCGA CCGCAGCGTT
TCCGCCGCCG AGGTGGGTGC AACGCTGAGG CAACGCATCA GCGACGCCCT GGTGCAGACA
GGCCGCTTTG CCGTGCTGGA CCGCGAATTC AGCCCCGAGA TCGAGCAGGA ACTGGCCATC
ATCGCCACGG GCCAGGCGCC CAGTGCCGAG CTGGCCAAGC TGTCCCAGGC CGCCAGCGCC
GATCTGGTGT GGAGCGCCCG CGTCAGCAGC TTTGCCTACA ACCGCCATGC CCGCCAGCTC
AAGACCAGCG ACCGCCAGCT GGTGAGCTAC TCGGGCGGCT GGGCCCTGTC GCAGAAGCTG
GTGAACGTGG CCACGCGCCA GGTCACGGCC TCGGATTCGC TGCGCGGCTC CGTCCCTTCC
ACGGCACCGA CCACGCTGGG CGCGGGCGTG GATGGCAACA AGGTCATGAC CGACATGAGC
GATGCGCTCG TCGCCGGCGT GGTCAGCTCC ATCCTGCAGC GCACCTTTCC GCTGACCGTG
GTCGCCCGTG ATGGCGAAAG CGTGGTACTG AGCCAGGGCG GCCAGGCCGT GAAGGAGGGC
GCGCGCTACC AGGTGGTGGC CATGGGCAAG GAGATGAAGG ACCCGCAGAC CGGGCAAAGC
CTGGGGCGCC TGGAGTCACC GTGCTGCGAA CTGGTGGTCG ATCGCGTGAC CCCCAACCTC
TCCTATGGCC ACCTGGAGAA CATGCGCGGC GGCATGGAAG ACCTGCCACC GGGCGGGCTG
CAGGTGCGTG AGGTGCTGAA GGCATCCGCC GCGCCCGTGC TGGCTGCACA GGCTGCATCA
GGTGATATGG CCGCGGCCGC TGAGCCCCAG GCCGCACCGG CACGTGCTGC ACAAGCGCCC
GCAGCACGCC GCGCGGCATC GCCCGCCAAG GAGGCCGATG CCCCGGTCGG CAAGAAGGAC
GACGACAACT GGTAA
 
Protein sequence
MRTRIIAAVV AACAAMSGCG DKPSEQPRTD APEQPQSVAP PVPDVGRLET VEVQVIGLGQ 
SPGEAMAQAL QMALLQVNGA VIQSASVTAR YGLDVALGQD AASLRASAFA EVVKQKSGGV
IQSVQVVDLE EPKPWAKRYK YTIKASISKF KPSAEMQKIK VVVGPVRFEQ ASLPMGDRSV
SAAEVGATLR QRISDALVQT GRFAVLDREF SPEIEQELAI IATGQAPSAE LAKLSQAASA
DLVWSARVSS FAYNRHARQL KTSDRQLVSY SGGWALSQKL VNVATRQVTA SDSLRGSVPS
TAPTTLGAGV DGNKVMTDMS DALVAGVVSS ILQRTFPLTV VARDGESVVL SQGGQAVKEG
ARYQVVAMGK EMKDPQTGQS LGRLESPCCE LVVDRVTPNL SYGHLENMRG GMEDLPPGGL
QVREVLKASA APVLAAQAAS GDMAAAAEPQ AAPARAAQAP AARRAASPAK EADAPVGKKD
DDNW