| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1232 |
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| Symbol | |
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| ID | 5746787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1373674 |
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| End bp | 1375554 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296311 |
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| Product | YhhN family protein |
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| Protein accession | YP_001562261 |
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| Protein GI | 160896679 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG3000] Sterol desaturase
[COG3714] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.957464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAC CCAGCCAAAT CATCGTCTTC GCCACGCCGG CCTTTTTGCT GCTGATCGCG
CTGGAATGGG GCGTGAGCCT GTGGCGCGGG CGCAATGCCT ACCGGCTGGC CGATGCCGTC
AGCTCCATCA GCCTGGGCAT GCTCAGCCAG ACCAGCGCCG TCTTCACCCA GCTGCTGCGC
ATAGGTCTGT ACACACTGGC CTTCGATCAT GTGGCGCTGT GGCGCAACGA CGCCTTCTGG
ACCAGCATTC CCGGCTGGCT GCTGGCCCTG CTGCTCTACG ACTTTTGCTA TTACTGGCTG
CACCGCATGG GCCATGAGGT GGCCGTGCTG TGGGCAGCCC ACGCCGTGCA CCACCAGAGC
CAGGACTACA ACCTGTCGAC GGCGCTGCGC CAGACCAGCT CGGGCGCGCT GCTGGGCTGG
CTGTTCTACC TGCCCATGGC GCTGGCCGGC GTGCCGCCGC TGGTGTTTGC CATCGTGGGC
CTGATCGATC TGCTCTACCA GTTCTGGGTC CATACCGAGC AGGTGCGGCG CCTGGGCTGG
TTCGACCGCT GGTTCTGCGC GCCCAGCAAC CACCGCGTGC ACCACGCCGT CAATGACTGC
TACCTGGACA GGAACTACGG CGGCATCCTC ATCGTCTGGG ACCGCCTGTT CGGCACCTTC
AAGCCCGAGG ACGACAGCGA GCCCTGTGTC TACGGCACGC GCGGCCTGCT GCAAAGCTGG
GATCCGCTGT GGGCCAACGC CGTGGTGTAC CGGCAACTCA TCCATGACAG CTGGCATGCG
CGGCGCTGTG GCGACAAGCT GCGCGTCTGG CTCAAGCCGC CCGGATGGCG CCCTGCCGAT
GTGGCGCAGC GCTTTCCCAG GCCGGCCTTC GACCTGGACG CGCACCGCGT GCTCTACGCA
CCGGGGATGG AACGCGGCCT GCGCTGGTTT GCAGGCCTGC AGTTCGTGGC GCTGATCGCC
GGGGTGTCGC TGTTTCTGTG GCATGCCGAC CAGTCCTCGA CGGCGCGCAA TGCGCTGTGG
TTTGGCGTGC TGCTGGCCTG CCAGTGGGCA CTGGGCGCGG CCATGCAGGG GCGCATCAGC
CTGTGGGTGG CCCTGGCCAT CGAGGCCGGC GCGCTGGCCA CCGCCACCGC CACCAGCGTG
CTGGACATGC TGCACTGGCA CTGGCTGTTC AAGCCGCTGA CCATGGTCTT TGCGCTGATC
GCCGTCATGC AGCTGTGGCG CGGCAGCACG GCCTTCTCGG CACTGGCGAA ACCCGCGCGC
GGCGCCTGCT GGCTGGCCGC GGCACTGGCG GCATCCCTGG CGGGCGACGT GTTCCTGATG
CTGCCCGATC TGTTCATCCC GGGCCTGGCC AGCTTTCTGC TGGCCCACCT GGCCTATATC
GTGCTGCTGC GCCAGGACGC GCCCTGGTTT GTACACCGGC CCTCGCTGGC CGCCACGCTG
GCCCTGGGCG CGGGCATGTA TGCCGTGCTC TGGCAGGGCG GCCTGCCCGC CGCGCTGCGC
CTGCCCGTGG CCGCCTATGT GCTGGTCATT GCGCTGATGG CGGCGCAGGC CCTGGGCCGC
GCGCGGCACC TGGGCGGCCA GCCCGCCTGG ACCGTGGCCA TCGGCGCCTG CTTCTTCATG
GCCAGCGACT CGCTGCTGGC CATCAACCGA TTTGTGCAGC CCTTCGACGG CGCGCAAGCC
GGCGTGCTGT CCACCTACTA CGCGGCGCAA CTGCTGATCG TGCAGGGCTG GCTGGACCGT
GGCGCATCGA CATCAGGGTT GACCCGAAGC AGCTCGCAAG GCACAATCGA GGGATCGCAT
TTTCAGGAGT CCTCCGTGGA CAGTGCCAGT TCAACCAGTG ACAAACAGCG CGCCGCAATG
GCTTCGCTGC TGGCTGACTG A
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| Protein sequence | MPSPSQIIVF ATPAFLLLIA LEWGVSLWRG RNAYRLADAV SSISLGMLSQ TSAVFTQLLR
IGLYTLAFDH VALWRNDAFW TSIPGWLLAL LLYDFCYYWL HRMGHEVAVL WAAHAVHHQS
QDYNLSTALR QTSSGALLGW LFYLPMALAG VPPLVFAIVG LIDLLYQFWV HTEQVRRLGW
FDRWFCAPSN HRVHHAVNDC YLDRNYGGIL IVWDRLFGTF KPEDDSEPCV YGTRGLLQSW
DPLWANAVVY RQLIHDSWHA RRCGDKLRVW LKPPGWRPAD VAQRFPRPAF DLDAHRVLYA
PGMERGLRWF AGLQFVALIA GVSLFLWHAD QSSTARNALW FGVLLACQWA LGAAMQGRIS
LWVALAIEAG ALATATATSV LDMLHWHWLF KPLTMVFALI AVMQLWRGST AFSALAKPAR
GACWLAAALA ASLAGDVFLM LPDLFIPGLA SFLLAHLAYI VLLRQDAPWF VHRPSLAATL
ALGAGMYAVL WQGGLPAALR LPVAAYVLVI ALMAAQALGR ARHLGGQPAW TVAIGACFFM
ASDSLLAINR FVQPFDGAQA GVLSTYYAAQ LLIVQGWLDR GASTSGLTRS SSQGTIEGSH
FQESSVDSAS STSDKQRAAM ASLLAD
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