Gene Daci_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1224 
Symbol 
ID5746779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1365735 
End bp1366193 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID641296303 
Producthypothetical protein 
Protein accessionYP_001562253 
Protein GI160896671 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA ACCAACTGCA ACTGTCCCTG CAATTCGCGC GCTTTGCCGA GGCACCTGTC 
CACCGCGCCG TGCTGTCCCG CAGCAAGGTC ACGCGCTGGA TACGCCACGC CCTGGCCGTC
GATGCCGAAA TCACCGTGCG CATCGTCGAC GCCGAGGAAG GCCAGCAGCT CAACCGCGAA
TACCGCCAGA AGGACTACGC CACCAACGTC CTGACCTTCG ACTACCAGCA GGAGCCCACG
GCCATGGCCG ACCTGGTGCT GTGCGCCCCC GTGGTCGAGC GCGAGGCGCG CGAGCAGAAC
AAGACGCTGG AGGAGCACTA CGCCCACCTG CTGGTGCATG GCACGCTGCA TGCCCAGGGC
TGGGACCATG AAACCAGCGA GCAGGACGCC GAGGAAATGG AAGCCTACGA GACCGAGATC
ATGGTCGAGC TGGGCTTTGC CGACCCCTAC GCCAAGTAG
 
Protein sequence
MSLNQLQLSL QFARFAEAPV HRAVLSRSKV TRWIRHALAV DAEITVRIVD AEEGQQLNRE 
YRQKDYATNV LTFDYQQEPT AMADLVLCAP VVEREAREQN KTLEEHYAHL LVHGTLHAQG
WDHETSEQDA EEMEAYETEI MVELGFADPY AK