| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1219 |
|---|
| Symbol | |
|---|
| ID | 5746774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1360454 |
|---|
| End bp | 1361212 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296298 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001562248 |
|---|
| Protein GI | 160896666 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.597323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGACA TCGCACTGCT CATGAGCGCC GCCTTCGTGG CCGGCGCGCT CAATGCCGTT
GCCGGGGGCG GCAGCTTCCT CACCCTGCCC GCCCTGGTCT TCACCGGCGT GCCGCCCGTG
GCCGCCAACG CCACCGGCAC CGTCGCCCTG CTGCCCGGCT ACATGGCCGG TGCCTGGGGC
TTTCGCCAGG ACATGGAGCC GCCGCCCGGC CTGGGCATGC GCGGCGTGAT CGTGCTGTCG
CTCATCGGCG GCTCGCTGGG CGCGGCTCTG CTGCTGGTCA CGCCCGACCA CCTGTTCCGC
AAGGTCGTCC CCTGGCTGCT GCTGGCCGCC ACCGCCATGT TCGCCTTCGC GCCCCAGCTC
AGGCGCATGG CATCACGCGG CAGCGCCGAG CATGCCGCCC ATGCATCGCC CCTGAAGGCC
GGCGCCGGCA TGCTGGCCGT GGCCATCTAC GGCGGCTACT TCAACGGCGG CCTGGGCATC
CTGCTGCTGG CCCTGTTCGG CCTGCTGGGC CAGACAAGGC TGCACGCCAT GAACGGCATG
AAGAACCTGG TCTCCGCCCT GCTCACGGCC ATTGCCGTCG CCATCTATGC GGCCGGCGGC
GTCGTGCAGT GGGAGCAGGC CCTGGTCATG ATGATTGCCG CCACCGCAGG CGGCTACGGC
GGAGCTCGCC TGGCGCGCCG CATCCCGCCC GAATGGCTGC GCGCAGGCAT CGTGCTGACG
GGGCTGGTGA TGGCGGGGGT GTTTTTCTGG AGGCAGTGA
|
|---|
| Protein sequence | MWDIALLMSA AFVAGALNAV AGGGSFLTLP ALVFTGVPPV AANATGTVAL LPGYMAGAWG
FRQDMEPPPG LGMRGVIVLS LIGGSLGAAL LLVTPDHLFR KVVPWLLLAA TAMFAFAPQL
RRMASRGSAE HAAHASPLKA GAGMLAVAIY GGYFNGGLGI LLLALFGLLG QTRLHAMNGM
KNLVSALLTA IAVAIYAAGG VVQWEQALVM MIAATAGGYG GARLARRIPP EWLRAGIVLT
GLVMAGVFFW RQ
|
|---|
| |