| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1209 |
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| Symbol | |
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| ID | 5746764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1345861 |
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| End bp | 1346874 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641296289 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001562239 |
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| Protein GI | 160896657 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03637] CRISPR-associated endonuclease Cas1, YPEST subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATA TCAAGGGCCA GGATCTCAAG ACCATTCTCC ATTCCAAACG CGCCAACATC
TATTACCTTG AGCACTGCCG TGTACTGGTC AATGGCGGGC GGGTGGAATA TGTGACCGAT
GCCGGCAAGC GCAGCCTGTA TTGGAATATT CCCATTGCCA ACACCACCAG CATCCTGCTG
GGCGCCGGCA CCTCCATCAC GCAGGCGGCC ATGCGGGAAC TGGCCAAGGC GGGCGTGCTG
GTCGGCTTTT GCGGCGGCGG TGGAACGCCT TTGTTCAGCG CCAATGAAGT CGATGTGGAA
GTCGCCTGGC TCACTCCGCA AAGCGAGTAC CGCCCCACTG AATACCTGCA GGCCTGGGTC
CAATTCTGGT TTGACGATGA ACTGCGCCTG CATGCCGCCA AACAATTGCA GGCTTTGCGA
TTGCAGCGGC TGCAGCAGGA ATGGGGTGCA CGTGCCTTGC GTGAATCCGG CTTTGCCGTG
GACATGGAGC GCCTGAAGGC GCTGGTGCAG CAATTTGCGG CGCTGATGGC CAATGCGCCC
GATGTCATGA CACTGCTGAC CGATGAGGCA CGGCTGACCA AGGCCTTGTT CAAGCTCGCC
GTGGACGCCG TGGGATATGG CGAATTCACA CGCGCCAAGC GCGGCACCGG CACCGATGGA
GCCAACCGCT ATCTGGACCA TGGCAACTAT CTGGCCTACG GACTGGGCGC CACGGCCACC
TGGGTGCTGG GCCTGCCCCA CGGTCTGGCC GTGCTGCATG GCAAGACGCG GCGCGGCGGC
CTGGTGTTCG ATGCGGCCGA TCTGGTCAAG GATGCGGCCA TCCTGCCGCA GGCCTTCCTG
TCGGCCATGC GCGGCGACGA CGAGCCGCAA TTTCGCCGCC AATGCATCGA GGCGCTCACG
CGCAGCGAAT CGCTGGACTT CATCATCGAC ACGCTCAAGC GCATTGCCGT CGACACGGCG
CGCATGGCCG GCGCGTCCGC CACGCCCGGC GCTGCGCAGG AGGCCGGCAC ATGA
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| Protein sequence | MQDIKGQDLK TILHSKRANI YYLEHCRVLV NGGRVEYVTD AGKRSLYWNI PIANTTSILL
GAGTSITQAA MRELAKAGVL VGFCGGGGTP LFSANEVDVE VAWLTPQSEY RPTEYLQAWV
QFWFDDELRL HAAKQLQALR LQRLQQEWGA RALRESGFAV DMERLKALVQ QFAALMANAP
DVMTLLTDEA RLTKALFKLA VDAVGYGEFT RAKRGTGTDG ANRYLDHGNY LAYGLGATAT
WVLGLPHGLA VLHGKTRRGG LVFDAADLVK DAAILPQAFL SAMRGDDEPQ FRRQCIEALT
RSESLDFIID TLKRIAVDTA RMAGASATPG AAQEAGT
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