Gene Daci_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1198 
Symbol 
ID5746753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1331765 
End bp1332613 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID641296278 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001562228 
Protein GI160896646 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC AAACCGTAGG CATCATCGGC GCAGGCACCA TGGGCAACGG CATCGCGCAG 
GCCTGCGCGG TATCGGGCAT CGACGTGGTC ATGGTGGACA TCTCGGAGGC CGCCGTCCAA
AAGGGCGTGG CCACCGTCTC GGGCAGCCTG GACCGCCTGA TCAAGAAGGA AAAGCTGACC
GAGGCAGAGA AGACCGCCGC CCTGGCCCGC ATCAAGACAT CGACCGACTA CGCGGCGCTC
AAGGGCGCGC AACTGGTCAT CGAGGCCGCC ACCGAGAACT ACGAGCTCAA GGTCAAGATC
CTCAAGCAGC TGGACGCCCT GCTGGATGCC GATGTCATCG TCGCCACCAA CACCTCGTCC
ATCTCCATCA CCCAGCTGGC CGCCGTGACG GGCCGTGCCG ACAAGTTCAT CGGCATGCAC
TTCTTCAACC CCGTGCCCAT GATGGCGCTG GTGGAGATCA TCGTCGGCCT GCAGACCAGC
GACGAGACGC ACGCCACGGT CAAGGAACTG TCCGAGCGCC TGGGCAAGAG CCCCATCACC
GTGAAGAACG CCCCCGGCTT CGTGGTCAAC CGCATCCTGG TGCCCATGAT CAACGAGGCC
TTCTTCGTGC TGGCCGAAGG CCTGGCATCG GCCGAGGACA TCGACGCCGG CATGAAGCTG
GGCTGCAACC AGCCCATCGG CCCGCTGGCC CTGGCCGACA TGATCGGCCT GGACGTGTGC
CTGGCCGTGA TGGAGGTCTA CCTCAAGGAA TTCGGCGACA GCAAGTACCG CGCCTGCCCC
CTGCTCAAGG AAATGGTGGC CGCCGGCCGC CTGGGCCGCA AGACGGGCCG CGGCGTGTAC
AGCTACTGA
 
Protein sequence
MAIQTVGIIG AGTMGNGIAQ ACAVSGIDVV MVDISEAAVQ KGVATVSGSL DRLIKKEKLT 
EAEKTAALAR IKTSTDYAAL KGAQLVIEAA TENYELKVKI LKQLDALLDA DVIVATNTSS
ISITQLAAVT GRADKFIGMH FFNPVPMMAL VEIIVGLQTS DETHATVKEL SERLGKSPIT
VKNAPGFVVN RILVPMINEA FFVLAEGLAS AEDIDAGMKL GCNQPIGPLA LADMIGLDVC
LAVMEVYLKE FGDSKYRACP LLKEMVAAGR LGRKTGRGVY SY