Gene Daci_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1197 
Symbol 
ID5746752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1330851 
End bp1331666 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID641296277 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001562227 
Protein GI160896645 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA ACACCCCCAC CCCGCCGCCC GAAGGCTGCA TCAGCTGCGA AGTGCGCGGC 
CATGTGCTGC TGATCGGCAT CAACCGCCCC GCCAAGCGCA ACGGCTGGAC GCCGCCCATG
TTCCAGCAGC TGGCCGAGGC CTATACGCGC CTGGACGACG ATCCCGAGTT GCGCGTGGGC
GTGCTGCATG CGTTTGGCAG CCATTTCACG GCGGGGCTGG ACCTGCCGGT GATGGCGGAG
TACCTGCGCT CGGGCAGGAA GGCCATCCCG CAAGGCCTGG TGGAGCCGCA CGACTACGGC
CTGGTCGGTT ACCGGCGCCG CGCCAAGCCC ATGGTGGTGG CGGTCAAGGG CATTTGCTTC
ACGGTGGGCA TCGAGCTGAT GCTGGGCGCC GACATCGTGG TCGCGGCCGA TGACTGCCGC
TTTTCCCAAC TGGAGGTGCA GCGCTGCATC ATGCCCACGG GCGGCGCCAC GCTGCGCATG
GCCGAGCGTG CGGGCGTGGG CAATGCCATG CTGCACCTGC TCACGGCCGA TGAGTTCGAC
AGCGCCGAGG CCTATCGCCT GAACTTCGTG CAGAAGGTGG TGCCGGCCGG CCAGGAACTG
GCCGAGGCCC TGCGCATTGC CGAGCGCATT GCCGCCCAGG CCCCGCAGGC CGTGGTGGCC
ACGCGGCTCA ATGTGCTCAA GGCCATCGAG CTGGGCCAGG CCGCCGCAGT GGCCGACTTC
ATTCCCGTGC AGCAGCGCCT GGCCAGCAGC GAGGATGCCG CCGAAGGCGT GCGCTCCTTC
ATCGAGAAAC GCCCCGCGCG CTTCACGGGC CGGTAG
 
Protein sequence
MDINTPTPPP EGCISCEVRG HVLLIGINRP AKRNGWTPPM FQQLAEAYTR LDDDPELRVG 
VLHAFGSHFT AGLDLPVMAE YLRSGRKAIP QGLVEPHDYG LVGYRRRAKP MVVAVKGICF
TVGIELMLGA DIVVAADDCR FSQLEVQRCI MPTGGATLRM AERAGVGNAM LHLLTADEFD
SAEAYRLNFV QKVVPAGQEL AEALRIAERI AAQAPQAVVA TRLNVLKAIE LGQAAAVADF
IPVQQRLASS EDAAEGVRSF IEKRPARFTG R