| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1189 |
|---|
| Symbol | |
|---|
| ID | 5746744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1324360 |
|---|
| End bp | 1324830 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296269 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001562219 |
|---|
| Protein GI | 160896637 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGT CTTCTGCCGG TGTCACCGCG TCCGACCATG ACGGGCCGGC CATCCTTTCC
GTGGGCGAAG TCGCCCGGCG CAGCGGCATC ACCGTCTCGG CCCTGCATTT CTACGAGCGC
CAGGGGCTGA TCGAGAGCCT GCGCACGCCC GGCAACCAGC GCCGCTATGC GCGTGCCGTG
CTGCGGCGCG TGGCGGTCAT CAAGGTGGCC CAGCGCATGG GCGTGCCGCT GGCCGAGATT
GCCGAGGCGC TGCAGGACCT GCCCAGCGGC CGCACGCCCA CGCAGGCCGA CTGGGCCGCG
CTGTCCGCGC GCTGGCGCCA CGCGCTGGAT GCGCGCATCC AGGGCCTGAC CCAGCTGCGC
GACCAGATCG ACGGCTGTAT AGGCTGCGGC TGCCTGTCCC TCAAGGTCTG CCCGCTGCGC
AATGACGGCG ACTGCCTGGC CGAAGACGGG CCGGGACCGC ACTTTCGCTG A
|
|---|
| Protein sequence | MNLSSAGVTA SDHDGPAILS VGEVARRSGI TVSALHFYER QGLIESLRTP GNQRRYARAV
LRRVAVIKVA QRMGVPLAEI AEALQDLPSG RTPTQADWAA LSARWRHALD ARIQGLTQLR
DQIDGCIGCG CLSLKVCPLR NDGDCLAEDG PGPHFR
|
|---|
| |