| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1184 |
|---|
| Symbol | |
|---|
| ID | 5746739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1320331 |
|---|
| End bp | 1320942 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641296264 |
|---|
| Product | HupE/UreJ protein |
|---|
| Protein accession | YP_001562214 |
|---|
| Protein GI | 160896632 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2370] Hydrogenase/urease accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCATC CCCGCCTTCT GCTCGCCCCG GCCCTGCTGG CCGCTGCCAC GGCCGCCAGC
GCCCATACGG GGGCCGGCGC CCACCTGCAT GCCGGCGACG GCGCCATGCA GGCCCTGATG
GCCGGGCTGT CCCATCCCAT CGCGGGCCTG GACCATCTGC TGGCCATGCT GGCGCTGGGC
CTGTGGTGCG GGCTGATGCT CAAGCGCCAG TGGCTGCCGC CCGTGGCCTT TGCAGCCTGC
ATGGCGCTGG GCCTGGCGCT GACGCAGACC CCGCTGGAGC TGCCGGCCGT GGAGCCCATG
GTGGCTGCAT CGCTGCTGGC CTTCGGCCTG CTGCTGGTGG CCCAGCGCCG CCTGCCCGTG
GCCCTGGCCA TGGTGCTGGC CGGCGCCTTC GCGCTGTTTC ACGGATACGC GCATGGCGAG
GTCTTCCCCC ACGCGCTGCC CGCAGCCGTG TTCTGGGCCT ACATGGCGGG CATGGTCGCC
ACCACGCTGG TGCTGCATGC CCTGGGCGTG GCCTTTGGCC GGGCCATGCG CGGCGGCACG
GCTTCGGCCT GGGCCGCACG CCTGGCCGGC GTGGCCGCCA TGGGCTACGG TGCCGTGGCG
CTGGCAGGCT GA
|
|---|
| Protein sequence | MFHPRLLLAP ALLAAATAAS AHTGAGAHLH AGDGAMQALM AGLSHPIAGL DHLLAMLALG
LWCGLMLKRQ WLPPVAFAAC MALGLALTQT PLELPAVEPM VAASLLAFGL LLVAQRRLPV
ALAMVLAGAF ALFHGYAHGE VFPHALPAAV FWAYMAGMVA TTLVLHALGV AFGRAMRGGT
ASAWAARLAG VAAMGYGAVA LAG
|
|---|
| |