Gene Daci_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1162 
Symbol 
ID5746717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1292209 
End bp1293123 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID641296242 
Producthypothetical protein 
Protein accessionYP_001562192 
Protein GI160896610 
COG category[S] Function unknown 
COG ID[COG2253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA CCTATCTCGA CACTGCGCGC CTGTTGACAC AGGTCGCGCC GCTGGTGTTT 
GTGGACGACA CGTTCGCGCT GAAGGGCGGA ACCGCGATCA ACCTGTTCGT GCGCGATATG
CCGCGCCTGT CCGTTGATCT GGACCTGGTG TTTCCCGATC ACAGGCCGTC ACGTGATGAG
GCGCTGCTGC GGATCAATCA GGCCATCCGG CAATCGGCAG AACGTCTGAC GAAGCGGGGC
TTTCAGACCC ATGCGCCGGT GGCTGCAGCG GGCCAGACCA AGCTGTTGGT GCGCCGCGGT
CCCGTGCAGG TCAAGATCGA AGTGAACTAT GTCATGCGCG GCACGGTGCT GCCGGTGCGG
CAGGCCTCGC TCACGCCAAC TGCGCGCGAT GTGCTGATGG CTGACCTGGA GATTCCCGTG
GTCTCCGCAG AGGACGTGTA CGGCGGCAAG CTTGTGGCCG CCCTGGACCG GCAGCACCCG
CGTGATCTGT TCGATGTGAT GCAGCTGTTC GCGCACGGCG GCATCACCTC AGGCATCCGG
CGCGCCTTCG TGGTCTATCT GGCCTGCAGC AACCGACCTT TGCACGAAGT GCTGTTTCCT
CCCTTGCGTG ATGTCCGGCA CGATTTCGAG AACAACTTCC GGGGCATGAC GGCCGAGCCT
GTGCCGCTGC AATCTCTGCT CGCAGCACGC GAGCGGTTAC TGCGGGAGCT TCAGCAAGGG
CTGGATGCCA GTGAGCGGCG CTTTTTGCTG TCGCTGGCCG CAGGAGCCCC CGATTGGCCG
GCGCTGGACA TCGCCCATCT CGAACACCTG CCCGGCGTGC GATGGAAGGT GCAGAACCTG
GCGCAGCTGC GCAGGTCCCA TCCCCGCAAG TTCGCCGAGC AGGCGGACCT GCTGGCCGCA
CGGCTGGTCA TCTGA
 
Protein sequence
MNQTYLDTAR LLTQVAPLVF VDDTFALKGG TAINLFVRDM PRLSVDLDLV FPDHRPSRDE 
ALLRINQAIR QSAERLTKRG FQTHAPVAAA GQTKLLVRRG PVQVKIEVNY VMRGTVLPVR
QASLTPTARD VLMADLEIPV VSAEDVYGGK LVAALDRQHP RDLFDVMQLF AHGGITSGIR
RAFVVYLACS NRPLHEVLFP PLRDVRHDFE NNFRGMTAEP VPLQSLLAAR ERLLRELQQG
LDASERRFLL SLAAGAPDWP ALDIAHLEHL PGVRWKVQNL AQLRRSHPRK FAEQADLLAA
RLVI