| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1158 |
|---|
| Symbol | |
|---|
| ID | 5746713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1287528 |
|---|
| End bp | 1288313 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641296238 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001562188 |
|---|
| Protein GI | 160896606 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACA AGAAGATCGG CGATGTCATC CTCGACATCA AGAACATCAG CCTGCGCTTC
GGCGGGGTGA AGGCGCTGAC GGACATCTCG TTCGATGTGC GCGAGCACGA GATCCGCTCC
ATCATCGGCC CCAACGGCGC GGGCAAGAGC TCCATGCTCA ACTGCATCAA CGGCGTGTAC
ACGCCGTCCG AGGGATCGAT CACCTTCCGG GGCAAGACCT TCAGCCACAT GAACAGCCGC
CAGGTGGCCG AGATGGGCGT GGCGCGCACC TTCCAGAACC TGGCGCTGTT CAAGGGCATG
AGCGTGATCG ACAACATCAT GACCGGCCGC AACCTGCAGA TCAAAAGCGG CATCCTGATG
CAGGCCCTGC GCCTGGGCCC GGCCCAGCGC GAGGAGATCC GCCACCGCGA GTTCGTCGAG
CACATCATCG ACTTCCTGGA GATCCAGGCC TACCGCAAGA CCCCCGTGGG CCAGCTGCCC
TACGGCCTGC AAAAGCGCGT GGACCTGGGC CGCGCCCTGG CCATGCAGCC GCAGGTGCTG
CTGCTGGACG AGCCCATGGC CGGCATGAAC GTGGAGGAAA AGCAGGACAT GTGCCGCTTC
ATCCTCGATG TCAACGACGA GTTCGGCTCC ACCATCGTGC TGATCGAGCA CGACATGGGC
GTGGTCATGG ACATCAGCGA CCGCGTCGTG GTGCTGGACT ACGGCAAGAA GATCGGCGAC
GGCGCACCCG ACGAGGTGCG CCAGAACGAA GACGTGATCC GCGCTTACCT TGGCACAGGC
CATTGA
|
|---|
| Protein sequence | MTHKKIGDVI LDIKNISLRF GGVKALTDIS FDVREHEIRS IIGPNGAGKS SMLNCINGVY
TPSEGSITFR GKTFSHMNSR QVAEMGVART FQNLALFKGM SVIDNIMTGR NLQIKSGILM
QALRLGPAQR EEIRHREFVE HIIDFLEIQA YRKTPVGQLP YGLQKRVDLG RALAMQPQVL
LLDEPMAGMN VEEKQDMCRF ILDVNDEFGS TIVLIEHDMG VVMDISDRVV VLDYGKKIGD
GAPDEVRQNE DVIRAYLGTG H
|
|---|
| |