Gene Daci_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1153 
Symbol 
ID5746708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1281651 
End bp1282898 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content69% 
IMG OID641296233 
Productputative phenylacetate-CoA ligase 
Protein accessionYP_001562183 
Protein GI160896601 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCT TCTACGACGC GCTGGAGACG CGCACCCCTG ACGAACGCGA AGCGGCGCTG 
CTGTCCGCCC TGCCCCGGCA GATCGCCCAT GCGCAGCAAC ACTCTGCCGC CTTCGCCCAG
ATCCTGGCCG GCGTCGATGC CGCGCAGATC ACCAGCCGCG AGGCCCTGGC CCGCCTGCCG
GTGACGCGCA AATACGAGCT GCTGCAGCGC CAGGCCGAGC AGCGGCCCGC GCAGATCTTC
GGCGGCTTCA ACGCCATCGG CCTGGGCCAG CCCATGCCGC GCCTGTTCTG CAGCCCCGGC
CCCATCTACG AGCCCGAAAG CCGCCGCCCC GACTACTGGC GCATGGCGCG CGCGCTGCAT
GCCTCGGGCT TTCGGCCCGG CGAGCTGGTG CACAACTGCT TCAGCTACCA CTTCGTGCCC
GCGGGCTCGA TGATGGAAAG CGGCGCCCAT GCGTTGGGCT GCACGGTGTT CGCAGGCGGC
ACGGGCCAGA CCGAGCAGCA GGTGCAGGCC ATGGCCGACC TGCGGCCCGC AGGCTACGTG
GGCACGCCCA GCTTCCTCAA GATCATTGTG GAAAAGTCCC TGGAGATGGG CCTGCCCATC
CCCTCCGTGA CCAAGGCCAT GGTCTCGGGC GAGGCCTTTC CGCCCTCGCT GCGCGACTGG
CTGGCCGAGC GCGGCATTGC CGGCTACCAG TGCTACGCCA CGGCCGACCT GGGCCTGATC
GCCTACGAGA CCGAGGCCCG CGAAGGCCTG GTGCTGGACG AGCAGGTCAT CGTCGAGATC
GTGCGCCCCG GCACGGGCGA CCCGGTGGCC CCCGGCGAGG TGGGCGAGCT GGTGATCACC
ACGTTCAATC CCGACTACCC GCTGATCCGT TTCGGCACGG GCGACCTCTC TGCCGTGCTG
CCCGGCCAGT GCCCCACGGG CCGCACCAAT GCGCGCATCA AGGGCTGGAT GGGACGCGCC
GACCAGACCA CCAAGGTGCG CGGCATGTTC GTGCATCCGG GCCAGATTGC CGACGTCGTG
CGCCGCTTCC CCCAGGTGGG GCGCGCGCGG CTGGTGGTCA CGGGCGAGAT GGCCAACGAC
CAGATGCAGC TGCTGGTCGA AACCCGCGAA ACCTCACCGG GCCTGGCCCA GCAACTGTCC
GATGCCGTGC GCGAAGTCAC CAAGCTGCGC GGCGATGTGC AGATGGTGCT GCCGGGCACC
CTGCCCAATG ACGGGAAGGT CATTGAAGAC GCGAGGTCGT ACAAGTAG
 
Protein sequence
MSAFYDALET RTPDEREAAL LSALPRQIAH AQQHSAAFAQ ILAGVDAAQI TSREALARLP 
VTRKYELLQR QAEQRPAQIF GGFNAIGLGQ PMPRLFCSPG PIYEPESRRP DYWRMARALH
ASGFRPGELV HNCFSYHFVP AGSMMESGAH ALGCTVFAGG TGQTEQQVQA MADLRPAGYV
GTPSFLKIIV EKSLEMGLPI PSVTKAMVSG EAFPPSLRDW LAERGIAGYQ CYATADLGLI
AYETEAREGL VLDEQVIVEI VRPGTGDPVA PGEVGELVIT TFNPDYPLIR FGTGDLSAVL
PGQCPTGRTN ARIKGWMGRA DQTTKVRGMF VHPGQIADVV RRFPQVGRAR LVVTGEMAND
QMQLLVETRE TSPGLAQQLS DAVREVTKLR GDVQMVLPGT LPNDGKVIED ARSYK