Gene Daci_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1152 
Symbol 
ID5746707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1280420 
End bp1281409 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content65% 
IMG OID641296232 
Producthypothetical protein 
Protein accessionYP_001562182 
Protein GI160896600 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TGTTCAAGAT CGCAGCCATT GCGCTGGCAG CCGGTGCAGC CCTTGGCGCC 
CACGCGCAGG ACTATCCTGC CGCAGGCAAG ACGATCACCC TCATCGTGCC GTTCACCGCA
GGCGGCCCGA CCGACAAGGT GGCCCGCGAT CTGGCCGAGT CCATGCGCAA GCAGTTGAAC
AATGCCACCA TCGTGGTGGA CAACGCCGAC GGCGCCGGCA GCACCATCGG CACGGCCAAG
GCCGCGCGTG CCCGTCCTGA CGGCTACACG CTGCTGATCA ACCACATCGG CATGTCCACG
ATCCCGTCGC TGTACCGCAA GCTGTCGTTC AACGTGCTCA ACGACTTCGA GTACGCCGGC
ATCATCAACG ACGTGCCCAT GACCCTGATC GGCCGCCCCA GCCTGCCGGC CAAGAACTTC
GCCGAGGTCA AGGACTGGAT CGGCAAGAAC CAGGGCAAGG TCAACCTGGC CAATGCCGGC
ATCGGTTCCG CCTCCCACCT GTGCGGCCTG ATGCTGCAGG CGTCCATGAA GACGGAAATG
ACGCCCGTGC CCTACAAGGG CGCCGCCCCC GCGATTGCCG ACCTGATCGG CAACCAGGTG
GACCTGCTGT GCGACCAGAC CACCAACACC ACGGGCCAGA TCACGGCCAA GAAGGTCCAG
GCCTATGCCG TGACCACGCC CAAGCGCCTG ACCATGCCCG CGCTCAAGGA CCTGCCGACG
CTGGCCGAAG TGGGCGTGCC CGACTTCCAG GTCACCATCT GGCACGGCCT GTACGCACCC
AAGGGCACGC CGGCCGACAT CGTCAAGAAG GTCAACGAGG CCATGAAGGC CGCCCTGAAG
GACCCCGAGT TCATCAAGCG CCAGGAAGCC CTGGGCGCCG TGATCGCCAG CGACGGCCGC
ATCGAGCCCG AAGGCCACAA GAAGTTCGTC CAGGCCGAGA TCGAGAAGTG GGGCAAGGTC
ATCAAGGCAG CCGGCACCTA CGCCGACTGA
 
Protein sequence
MKALFKIAAI ALAAGAALGA HAQDYPAAGK TITLIVPFTA GGPTDKVARD LAESMRKQLN 
NATIVVDNAD GAGSTIGTAK AARARPDGYT LLINHIGMST IPSLYRKLSF NVLNDFEYAG
IINDVPMTLI GRPSLPAKNF AEVKDWIGKN QGKVNLANAG IGSASHLCGL MLQASMKTEM
TPVPYKGAAP AIADLIGNQV DLLCDQTTNT TGQITAKKVQ AYAVTTPKRL TMPALKDLPT
LAEVGVPDFQ VTIWHGLYAP KGTPADIVKK VNEAMKAALK DPEFIKRQEA LGAVIASDGR
IEPEGHKKFV QAEIEKWGKV IKAAGTYAD