| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1150 |
|---|
| Symbol | |
|---|
| ID | 5746705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1278829 |
|---|
| End bp | 1279731 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641296230 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001562180 |
|---|
| Protein GI | 160896598 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGTGGG ACGACGCCCG CATCTTCCTG GCCATTGCCC GCGCCGGCAG CCTGAGCGGT
GCCTCGGCCG CGCTGGGGCT GGGCGTGGCC ACGGTCTCGC GCCGGCTGGA CCGGCTGGAG
TCCGCGCTGT CCATGCCGCT GTTCAGCCGC CACCAGAGCG GCTATCGGCT CACGGCCGAC
GGCCAGGCGC TGCTGGCCCC GGCCGAGGCG CTGGAGCAGG CGGCCCAGGC CCTGGGCGAC
GCCGCGCAAA GCCAGGCGCA GGTCGCGGGC GTGGTGCGGC TGGCCACGGC CGAGAACCTG
GCCAACCCGC TGATCGCGCC CTCGCTGGTC CCTCTGTTCG CCCGCCACCC GGGTCTGCGC
GTGCAGCTGG TCAGCGGCGT GCAGACGCTG AACCTGCACC GGCGCGACGC CGACCTGGCC
GTGCGCATGA CCCAGCCCGA GGCCGGCCAC CTCACGATAC GGCGCCTGGG CACGCTGGGC
TTCGGCCTGT ATGGATCGGC CGGCTACGTG CAAGGCCGCG CCGGCGGAAA CGGAAGCGCG
GGCACCCACG GCTCGGACCC GTTCGAGGGC GACGCCTTCA TCGGCTGGGA TGACGGCCAT
GCCCACCTGC CCGCCGCACG CTGGATGGCG CGCGCCCTGC GCGGGCGGCC CTGCCGGCTG
GAGACCAATA CCCTGTCCGC GCAGCTGGCC GCGGCCCAGG CGGGCCTGGG CCTGGCCGTG
CTGCCGCATT TCCTGGCGCG GCAGGCGGGG CTGGTCTGCG TGGAGCCGCA GCTGGGCGCC
GACCAGCCGA TCTGGCTTGC CATGCATGCC GACCTTGCCC ATTCAAGGCG GGTGCGGGCC
GTGGCCGACC ACCTCATTGA ACTGTTCGAG CGGCGGCAAG CCGAACTCGA AGGCCCGGCC
TGA
|
|---|
| Protein sequence | MQWDDARIFL AIARAGSLSG ASAALGLGVA TVSRRLDRLE SALSMPLFSR HQSGYRLTAD
GQALLAPAEA LEQAAQALGD AAQSQAQVAG VVRLATAENL ANPLIAPSLV PLFARHPGLR
VQLVSGVQTL NLHRRDADLA VRMTQPEAGH LTIRRLGTLG FGLYGSAGYV QGRAGGNGSA
GTHGSDPFEG DAFIGWDDGH AHLPAARWMA RALRGRPCRL ETNTLSAQLA AAQAGLGLAV
LPHFLARQAG LVCVEPQLGA DQPIWLAMHA DLAHSRRVRA VADHLIELFE RRQAELEGPA
|
|---|
| |