Gene Daci_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1142 
Symbol 
ID5746697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1270122 
End bp1271873 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content69% 
IMG OID641296222 
Productsulfatase 
Protein accessionYP_001562172 
Protein GI160896590 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.285373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC GCCTGCTCGC ACACCCCCCT CTGGCCAGTT CATCCGCCAC CGGCACGGCC 
TCCTCGTCTA CCCAGACCCC CCACACCAGC CTTGCGGCGC GGCTGCGCAT GGCCTGGAGC
GCCCCGCGCT CGCCCCAGGC CGTGGCCCTG GTGCTGGCGC TGTGGCTGCT GGCCACCGCG
AACTGGGCGC TGTGGCTGCG CCTGCCCCAC CTCGAAGGCT ATGACGGCAG CCTGGCCACC
CTGGTGCTGC GCCTGCTGCC GCTGGGCCTG GGCGGCATCC TGCTGCTGCT GTCGCTGACG
GCCTGGCCGC GCGGCATGAA GCCGCTGTGG ATCGCCCTGC CCTGGATTGC CGGCTCGGCC
CAGTACTTCA TGACTGCCTA CGGCACGGTC ATGGACGGCG GCATGATCAA CAACATCCTG
CAGACCGACC TGCGCGAGAG CAGCGACCTG TTCAACCCCC AGTTGCTGCT GCAGCTGCTG
CTGGTGGCCG GCCTGCCCAC GGCCTGGCTG CTGCGGCTGC GCATCATCCG CCCGCGCCGC
AGCATGCAGA CGGTGCTGCG CACGCTGGGG CTGCTGGCCG CCTCGGTGGT GCTGCTGGCG
GCATCGGTCT TTGTCTCGTA CCGCGAGCTG GCCCCCGTGA TCCGCAACAA CCTGTGGATG
CGCCACATGC TCAACCCCGT GAGCCCCGTG CTGGCCTCGC TGGACGCGGT GCTCAAGCCC
ATCCTGCGGC CCAAGCGCCC GTTTGCCAGC ATTGCGGCTG GTGCCACGCT GGGCGCCACC
TACGCGGCCG AGCGCAAGCC GCCGCTGTTC GTCATCGTGG TGGGCGAGAC GGCGCGCGCC
GCCAACTGGG GCCTGAACGG CTATGCCCGC GACACCACGC CCGAGCTTGC CAAGCGCAAG
GTGCTCAACT GGAGCAACGT GACCTCCTGC GGCACCAGCA CGCGCGAATC CGTGCCCTGC
ATGTTCTCGC ACCTGGGCCG CACGGGCTTC TACAAGAGCA AGGTGGACTA CGACAACCTG
GTGGACGTGC TGTACAACGC CGGCCTGGCC GTGCTGTGGG TGGACAACCA GGCCGGCTGC
AAGGGCGTGT GCGAACGCAT TCCCAACGCC AGCACGGCCG ACCGCCTGAA CACGCCCGAC
GGCAAGGCCC TGTGCTCCAG CGACGGCGAA TGCCTGGACG GCATCCTGCT CAGCGGCATC
GACGAACGCA TCGCTGCCCT GCCGCGCGAG CGCCGCGAGC GCGGCGTGGT GCTGGTCATG
CATGAGATGG GTAGCCACGG CCCGGCCTAC TACAAGCGCT CCACGCCCGA GACCAAGGTC
TTCCAGCCCG AATGCCTGAC CAATGCACTG TCCAGCTGCA CGCGCGAGCA GGTGGTCAAC
GTCTACGACA ACTCCATCCG CTACAACGAC CACTTCCTGT CGCAGACCAT CGACTGGCTG
GCAAGCCAGC AGTCGCACTA CCAGACCGGC ATGGTCTACA TGTCGGACCA TGGCGAGTCG
CTGGGCGAGA TGGGCATCTA CCTGCACGGC ATGCCCTACG CCATGGCGCC CGAGGAGCAA
AAGCACATTC CCATGATTGC CTGGCTGGGC AACCTGGGCG AGCGCACCGG CGTGTCCGAG
CGCTGCGTGC GCGGCCAGCT GGACACGCCG CTGTCGCACG ACAACCTCTA CCACACCACC
CTGGGCCTGC TGGACGTGAC CAGCCCCACC TACCAGAAGC CCCTGGACGC GCTGGCCGGC
TGCCGCAGTT GA
 
Protein sequence
MPERLLAHPP LASSSATGTA SSSTQTPHTS LAARLRMAWS APRSPQAVAL VLALWLLATA 
NWALWLRLPH LEGYDGSLAT LVLRLLPLGL GGILLLLSLT AWPRGMKPLW IALPWIAGSA
QYFMTAYGTV MDGGMINNIL QTDLRESSDL FNPQLLLQLL LVAGLPTAWL LRLRIIRPRR
SMQTVLRTLG LLAASVVLLA ASVFVSYREL APVIRNNLWM RHMLNPVSPV LASLDAVLKP
ILRPKRPFAS IAAGATLGAT YAAERKPPLF VIVVGETARA ANWGLNGYAR DTTPELAKRK
VLNWSNVTSC GTSTRESVPC MFSHLGRTGF YKSKVDYDNL VDVLYNAGLA VLWVDNQAGC
KGVCERIPNA STADRLNTPD GKALCSSDGE CLDGILLSGI DERIAALPRE RRERGVVLVM
HEMGSHGPAY YKRSTPETKV FQPECLTNAL SSCTREQVVN VYDNSIRYND HFLSQTIDWL
ASQQSHYQTG MVYMSDHGES LGEMGIYLHG MPYAMAPEEQ KHIPMIAWLG NLGERTGVSE
RCVRGQLDTP LSHDNLYHTT LGLLDVTSPT YQKPLDALAG CRS