Gene Daci_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1135 
Symbol 
ID5746690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1263596 
End bp1264618 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID641296215 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001562165 
Protein GI160896583 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC TTGCCAACCC GACCCTGCCT TCGGCACCGG CCTCAGATTA CGCGCTGGGC 
GAACTCGCCA AGGAGGCCCG CATGGGCGGC CAGGGGCAGG AGACGCGCGC ACGGGAGGTG
CGGGTGATCG ATATCTCCGA CTTTGACCGC CGCAAGGCCG AGATCGCCGA TGCGATCTGG
CAGGCCTCGG TGGAGATCGG CTTCTTCCAG GTGTCGGGCC ACGGCATTCC CCAGCCCGAT
ATCGATGCGG CCTTCGGGCG TGCCGAGCAG TTGTTCGCCC TGCCGCGCGA GGTGAAGGCG
CAGTGGCCGC TGTCGCGCAA TGCGGGCTGG GAGCACAAGG CGCAGATCCG GCCTTCCACG
CGCACGCCCG ACCAGAAGGA GTCCTACCAG ATGACGCGCC CGCGCATGGC CGGCCTGTGG
CCCACGCAGC AGGAGCTGCC GGGCTTTCAG CAGGCCACGC TGGGCTTCGA GCGCCAGTGC
TGGCAGGTGG GCATGCAGCT GCTGTCGTGC TTTGCGCACA AGCTGGGCTT TGATGCGGAC
TTCTTCACGC GCGCCCACGA CCCTTCGGTG CCCGCCTACC AGAGCACGCT GCGCATGCTG
CACTACTTCG CGGTCGATCC CGCGCTCAAG GACGAGCTGG GCCTGTGGCG CGCAGGCGCC
CACACCGACT TCGACTGCCT GACCCTGCTG TTCCAGCGCG CAGGCCAGGG GGGCCTGCAG
GTGCTGCCGG GCAAGGAAAT GGAAGGCCAG CAATGGACGC CCGTGGACCC CGTGGAAGGC
GTGATCACCT GCAACATCGG CGACATGCTC ACGCGCTGGA GCGACGACCA GTTGCCCAGC
AACTTCCACC GCGTGCGCAA TCCCCTGCCC CATGAATACC AGGGCGCGCG CTACAGCCTG
GCCTTCTTCT GCCAGGCCAA CGAGGACGCG GTGATCGAAG GTCCGCAAAA GAAGTACCCG
CCCATCACGG GCGCGGAGTA CCTGCGCCAG CGCATCAGCG CCAACTTCTC GAACAAATAT
TGA
 
Protein sequence
MNMLANPTLP SAPASDYALG ELAKEARMGG QGQETRAREV RVIDISDFDR RKAEIADAIW 
QASVEIGFFQ VSGHGIPQPD IDAAFGRAEQ LFALPREVKA QWPLSRNAGW EHKAQIRPST
RTPDQKESYQ MTRPRMAGLW PTQQELPGFQ QATLGFERQC WQVGMQLLSC FAHKLGFDAD
FFTRAHDPSV PAYQSTLRML HYFAVDPALK DELGLWRAGA HTDFDCLTLL FQRAGQGGLQ
VLPGKEMEGQ QWTPVDPVEG VITCNIGDML TRWSDDQLPS NFHRVRNPLP HEYQGARYSL
AFFCQANEDA VIEGPQKKYP PITGAEYLRQ RISANFSNKY