Gene Daci_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1131 
Symbol 
ID5746686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1259765 
End bp1260922 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content69% 
IMG OID641296211 
Productextracellular ligand-binding receptor 
Protein accessionYP_001562161 
Protein GI160896579 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGAC CCAAGACGGC GTTCAGCCGC AGACAGTTCA TCGCAGCCAG CACGGCTGCT 
GCCGCCACCT GGACCGGCGC AGTGCGCGCC CAGGACGCGG GAGGCACCAT CGTGCTGGGC
CAGTCCTGCC CGATGACGGG CCCTGCGGCA CAGATCGGCC AGCCCTTCCA TGAAGGCGCC
AAGCTGTACT TCGAGCAGCT CAACGCGCAG GGGGGCATTG CCCGGCGCAA CATCGAACTG
CGCGTGATGG ACGACGGCTA CGAGCCCGAG CGCTGCGCGG CCAATACCCA GCGCTTCCTG
TCCGACGACG TGTTCGCCCT GTTCGGCTAC GTGGGCACCT CCACCAGCAT GGCCGCGCTG
CCGCTGCTGC AAAAGGCGCG CGTGCCCCTG TTCGCACCGC TGACGGGCGC CGACGCGCTG
CGCCAGCCCC AGCTGGCCCA CCTGGTCTTC AATGTGCGCG CCTCCTATGC CGACGAGACG
GCGCTGATGG TGCGCCACCT CACGGGCCTG GGCCTGAAGA AGGTGGCCGT GTTGCACCAG
AACGATGCCT ATGGCGAATC GGGCCTGGCC GGTGTCAAGG CGGCGCTGGC CGCCAAGGGG
CTGGAGCCCG TGGGCGCGGC CACGGTGGAG CGCAACTCGA ACAATGTGGC GGCGGCCGTC
AAGACGCTGG TGCCGCTGGG CGCCGATGTC ATCGTGCAGA TCGTCACCTA CTCGGCCAGC
GCGGCCTTTG TGCGCGCGGC GCGCCAGGCA GGCTTTGGCG GGCAGTTCTA CAACGTGTCC
TTCGTGGGTG CCCAGGCGCT GTCGGAGACG CTGGGCAAGG ATGCCGAAGG CGTGGTCGTC
ACCCAGGTCG TGCCCTCGCC CTTCCAGACC TCGCGCCAGA TCACGCGCGA TTTCCTGGCG
GCCATCCAGA AGGGCGGCGG CAAGCTGACG CCCAACTATT CCAGCATGGA AGGCTACTTG
GCGGCGCGCG TGTTCGCCGA TGCGCTGCGC CAGGCATCGG CCTCGGGCAA GCCCACGCGC
GACGGCCTGG TGGCCGCGCT CGACGCCATG CACGGCCAGC AGGTGGCCGG CTTCCCGCTG
GTCTTCAAGC CGCAGTCCGG CAAGCCGCGC TTCGTGGAGT TGTCCATGCT GACCGGCGAC
GGCAAGGTCC GGGTGTAG
 
Protein sequence
MLRPKTAFSR RQFIAASTAA AATWTGAVRA QDAGGTIVLG QSCPMTGPAA QIGQPFHEGA 
KLYFEQLNAQ GGIARRNIEL RVMDDGYEPE RCAANTQRFL SDDVFALFGY VGTSTSMAAL
PLLQKARVPL FAPLTGADAL RQPQLAHLVF NVRASYADET ALMVRHLTGL GLKKVAVLHQ
NDAYGESGLA GVKAALAAKG LEPVGAATVE RNSNNVAAAV KTLVPLGADV IVQIVTYSAS
AAFVRAARQA GFGGQFYNVS FVGAQALSET LGKDAEGVVV TQVVPSPFQT SRQITRDFLA
AIQKGGGKLT PNYSSMEGYL AARVFADALR QASASGKPTR DGLVAALDAM HGQQVAGFPL
VFKPQSGKPR FVELSMLTGD GKVRV