Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1131 |
Symbol | |
ID | 5746686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1259765 |
End bp | 1260922 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296211 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001562161 |
Protein GI | 160896579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCGAC CCAAGACGGC GTTCAGCCGC AGACAGTTCA TCGCAGCCAG CACGGCTGCT GCCGCCACCT GGACCGGCGC AGTGCGCGCC CAGGACGCGG GAGGCACCAT CGTGCTGGGC CAGTCCTGCC CGATGACGGG CCCTGCGGCA CAGATCGGCC AGCCCTTCCA TGAAGGCGCC AAGCTGTACT TCGAGCAGCT CAACGCGCAG GGGGGCATTG CCCGGCGCAA CATCGAACTG CGCGTGATGG ACGACGGCTA CGAGCCCGAG CGCTGCGCGG CCAATACCCA GCGCTTCCTG TCCGACGACG TGTTCGCCCT GTTCGGCTAC GTGGGCACCT CCACCAGCAT GGCCGCGCTG CCGCTGCTGC AAAAGGCGCG CGTGCCCCTG TTCGCACCGC TGACGGGCGC CGACGCGCTG CGCCAGCCCC AGCTGGCCCA CCTGGTCTTC AATGTGCGCG CCTCCTATGC CGACGAGACG GCGCTGATGG TGCGCCACCT CACGGGCCTG GGCCTGAAGA AGGTGGCCGT GTTGCACCAG AACGATGCCT ATGGCGAATC GGGCCTGGCC GGTGTCAAGG CGGCGCTGGC CGCCAAGGGG CTGGAGCCCG TGGGCGCGGC CACGGTGGAG CGCAACTCGA ACAATGTGGC GGCGGCCGTC AAGACGCTGG TGCCGCTGGG CGCCGATGTC ATCGTGCAGA TCGTCACCTA CTCGGCCAGC GCGGCCTTTG TGCGCGCGGC GCGCCAGGCA GGCTTTGGCG GGCAGTTCTA CAACGTGTCC TTCGTGGGTG CCCAGGCGCT GTCGGAGACG CTGGGCAAGG ATGCCGAAGG CGTGGTCGTC ACCCAGGTCG TGCCCTCGCC CTTCCAGACC TCGCGCCAGA TCACGCGCGA TTTCCTGGCG GCCATCCAGA AGGGCGGCGG CAAGCTGACG CCCAACTATT CCAGCATGGA AGGCTACTTG GCGGCGCGCG TGTTCGCCGA TGCGCTGCGC CAGGCATCGG CCTCGGGCAA GCCCACGCGC GACGGCCTGG TGGCCGCGCT CGACGCCATG CACGGCCAGC AGGTGGCCGG CTTCCCGCTG GTCTTCAAGC CGCAGTCCGG CAAGCCGCGC TTCGTGGAGT TGTCCATGCT GACCGGCGAC GGCAAGGTCC GGGTGTAG
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Protein sequence | MLRPKTAFSR RQFIAASTAA AATWTGAVRA QDAGGTIVLG QSCPMTGPAA QIGQPFHEGA KLYFEQLNAQ GGIARRNIEL RVMDDGYEPE RCAANTQRFL SDDVFALFGY VGTSTSMAAL PLLQKARVPL FAPLTGADAL RQPQLAHLVF NVRASYADET ALMVRHLTGL GLKKVAVLHQ NDAYGESGLA GVKAALAAKG LEPVGAATVE RNSNNVAAAV KTLVPLGADV IVQIVTYSAS AAFVRAARQA GFGGQFYNVS FVGAQALSET LGKDAEGVVV TQVVPSPFQT SRQITRDFLA AIQKGGGKLT PNYSSMEGYL AARVFADALR QASASGKPTR DGLVAALDAM HGQQVAGFPL VFKPQSGKPR FVELSMLTGD GKVRV
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