| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1128 |
|---|
| Symbol | |
|---|
| ID | 5746683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1254498 |
|---|
| End bp | 1255472 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296208 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001562158 |
|---|
| Protein GI | 160896576 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.794936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGTA GACAATTCCT GGCCGCCGTG GCGGCCTCAT CCGCCGGCAT GGCCGCGCCT
TTTGCACAGG CGCAGGACTG GCCCGCCAGC AACATCCGCT GGGTCGTGCC CTATCCGCCC
GGCGGCGGCA CCGACGTGCT GGCGCGCACC GTGGCCGAGG CCATGCGCCA GACGCTGAAC
CAGACCATCG TGGTGGACAA CCGCCCCGGC GCCTCCACCA ACATCGGCGC CCAGATCGTG
GCCACGGCCA AGCCCGACGG CTACACCATC ATGTCGGCCG ACAACGCCGT GCTGGCCTAC
AACGAGCACC TGTTCAGCAA GCTGTCCTTC AACCCCGAAA AGGACTTCAC CTACATCGGC
GGCATCAGCC GCTTCCCGAT GGCGCTGGTG GTGAACCCGA ACTTCGAGGC CAAGACCTTC
AAGGAATTCC TGGCCTACGT GAAGGCGCAT CCGGGCCAGG TCAACTACGC CTCTCCCGGC
AACGGTTCGC CCCACCACCT GGCCATGGAG ATGTTCAAGA ACCGCACGGG CACCTTCCTG
ACGCACATTC CCTACCGTGG CGCGGCGCCC GCGCTGGCCG ACGTGATGGG CGGCCAGGTG
CCCTGCATGT TCCTGGACCT GGCCTCGGGC CTGCCCGTGA TCCAGTCGGG CAAGGTGCGC
GCCCTGGCCA TCGGCACGGG CAAGCGCGTG CCCAGCCTGC CCGAGCTGCC CACGCTGGCC
GAGGTCGGCG TGCCCGACAC CGAGGTCTAT GCCTTCCAGG GCATCCTGGG CCCGGCCAAG
ATGCCCCCCG CCGTGGTGCA GCGCCTGAAC GCCGAGCTCA ACAGGGCGCT GGCCAACCCC
GCCGTGGTCA AGCGCATGCA GGACTTCGGC ATGGAGGCGC TGCCCGGCAC GCCCGAGCAG
TTCCTGGCCA TGTCGCGCGC GGAGTCCAAG CGCTGGGGGG CCATCATCAA GAGCGCGGGC
GTGAAGCTGG ACTGA
|
|---|
| Protein sequence | MDRRQFLAAV AASSAGMAAP FAQAQDWPAS NIRWVVPYPP GGGTDVLART VAEAMRQTLN
QTIVVDNRPG ASTNIGAQIV ATAKPDGYTI MSADNAVLAY NEHLFSKLSF NPEKDFTYIG
GISRFPMALV VNPNFEAKTF KEFLAYVKAH PGQVNYASPG NGSPHHLAME MFKNRTGTFL
THIPYRGAAP ALADVMGGQV PCMFLDLASG LPVIQSGKVR ALAIGTGKRV PSLPELPTLA
EVGVPDTEVY AFQGILGPAK MPPAVVQRLN AELNRALANP AVVKRMQDFG MEALPGTPEQ
FLAMSRAESK RWGAIIKSAG VKLD
|
|---|
| |