Gene Daci_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1126 
Symbol 
ID5746681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1252384 
End bp1253406 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID641296206 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001562156 
Protein GI160896574 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CCACATACAA GGACGGATCG CGGGACGGGC AACTGGTCGT GGTGTCACGC 
GACCTGAGCC AGGCCCATTA TGCGACCGGC ATAGCGAGCC GCCTGCAGCA GGTGCTCGAC
GACTGGAGCT ACATGGCGCC CCAGCTGCAG GACCTGTACC ACCTGCTCAA CAGCGGCAAG
GCGGTCCATG CCTTTGCCTT CGATCCGCGC CAGTGCATGG CGCCGCTGCC GCGCGCCTAC
CAATGGGCCG ACGGCTCGGC CTACATCAAC CATGTGGAGC TGGTGCGCCA GGCGCGCGGC
GCCGAGGTGC CCGCCAATTT CTACACCGAC CCGCTGATGT ACCAGGGCGG CAGCGACGAT
TTCCTGGGCC CCTGCGACGA TGTGGTGGTG CCCAGCGAGT CCATGGGCAT CGACTTCGAG
GCCGAGATCG CCGTCATCAC CGCCGACGTG CCCATGGGCG CCACGCCCGA GCGTGCGCTG
GGCGGCGTGC GCCTGGTCAT GCTGGCCAAC GACGTGAGCC TGCGCAACCT GATCCCCAAT
GAGCTGTCCA AGGGCTTCGG CTTCTTCCAG TCCAAGCCTG CCACCTCCTT CAGCCCCGTG
GCCGTGACGC TGGACGAGCT GGGCGACGCC TGGAAGGGCG GGCGCCTGCA CCTGACGCTG
CAGTCCATCT GGAACGGCCG CAAGGTCGGC ATGTGCGATG CGGGCGAGGA CATGAGCTTT
CACTTCGGCC AGCTCATCGC CCATATCTGC AAGACGCGCA ATGTGCGCGC CGGCTCCATC
GTGGGCAGCG GCACCGTGAG CAACAAGGGC GTGGAAAGCG GCAAGGGCAA GAACCGGCGC
ATGGAGTGGC CCAAGGGCTA CAGCTGCATT GCGGAGAAGC GCTGCATAGA GACCATCCAG
GACGGCGCGC CCAAGACCGA GTTCATGCGC TTTGGCGACA CCATCCGCAT CGAGATGAAG
GGCAAGGACG GCCAGAGCAT CTTCGGCGCC ATCGACCAGA ACATCGTCGA GCCTGCCGAA
TGA
 
Protein sequence
MKLATYKDGS RDGQLVVVSR DLSQAHYATG IASRLQQVLD DWSYMAPQLQ DLYHLLNSGK 
AVHAFAFDPR QCMAPLPRAY QWADGSAYIN HVELVRQARG AEVPANFYTD PLMYQGGSDD
FLGPCDDVVV PSESMGIDFE AEIAVITADV PMGATPERAL GGVRLVMLAN DVSLRNLIPN
ELSKGFGFFQ SKPATSFSPV AVTLDELGDA WKGGRLHLTL QSIWNGRKVG MCDAGEDMSF
HFGQLIAHIC KTRNVRAGSI VGSGTVSNKG VESGKGKNRR MEWPKGYSCI AEKRCIETIQ
DGAPKTEFMR FGDTIRIEMK GKDGQSIFGA IDQNIVEPAE