Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1125 |
Symbol | |
ID | 5746680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1251478 |
End bp | 1252257 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296205 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001562155 |
Protein GI | 160896573 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGG AACGCGCAGG GATTCAATCG GTCGAGGTCG GTTTTACGTT GCTGGAGGCG CTGACGCGCG CCCGGGGCCC GCAGATGCTC AAGGACCTGG CGTCCGACGC CGGCATGAGC GCCGCCAAGG CGCACCGCTA CCTCGTGAGC TTCCAGCGCA TCGGCCTGGT CACACAGGAC GCGCGCACCT CCCGCTACGA CCTGGGCCCG GCCTCGCTCA AGCTGGGCCT GGCCTCGCTG GCGCGGCTGG ACCCCGTGCG GCTGGCGCGC GAACGCATGC CCGCACTCAT GGAGCGCATC CACCACACGG CGGCCATCGC CGTCTGGGGC AACCACGGGC CGACCATCGT GCACTGGGAG GAAAGCGCGC AGTCGGTCAC CGCCAACCTG CGCCTGGGCG ATGTCATGCC CATGCTGGCC TCGGCCACCG GGCGCTGCTT CGCAGCCTGG CTGCCGCGCG AGGTCACGGC CCCGCTGCTG GAGCCCGAAG TGGACAAGGC CCGCCGCATC CAGCGCAAGG ACCTGCCGCT CACGCCCGAG GCCATAGACG CCATGCTGGC CGAGGTGCGC GAGCGCGGCA CCGCCCGCGT GGTCGATACC GTGCTGCCCG GCATCGTGGC CTTTTGCACG CCGGTCTTCG ACTCCTCGGG CCATATCGTG CTGGGCCTGA CCACGCTGGG CTCGATTGCC ACTTTCGACC CCGAATACGG CGGCGCCATC GACGCGCCGC TGCGCGAGGC CTGCGTGCAG CTGTCCCAGG ACCTGGGCTG GAATGCCTGA
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Protein sequence | MDKERAGIQS VEVGFTLLEA LTRARGPQML KDLASDAGMS AAKAHRYLVS FQRIGLVTQD ARTSRYDLGP ASLKLGLASL ARLDPVRLAR ERMPALMERI HHTAAIAVWG NHGPTIVHWE ESAQSVTANL RLGDVMPMLA SATGRCFAAW LPREVTAPLL EPEVDKARRI QRKDLPLTPE AIDAMLAEVR ERGTARVVDT VLPGIVAFCT PVFDSSGHIV LGLTTLGSIA TFDPEYGGAI DAPLREACVQ LSQDLGWNA
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