Gene Daci_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1125 
Symbol 
ID5746680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1251478 
End bp1252257 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID641296205 
ProductIclR family transcriptional regulator 
Protein accessionYP_001562155 
Protein GI160896573 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG AACGCGCAGG GATTCAATCG GTCGAGGTCG GTTTTACGTT GCTGGAGGCG 
CTGACGCGCG CCCGGGGCCC GCAGATGCTC AAGGACCTGG CGTCCGACGC CGGCATGAGC
GCCGCCAAGG CGCACCGCTA CCTCGTGAGC TTCCAGCGCA TCGGCCTGGT CACACAGGAC
GCGCGCACCT CCCGCTACGA CCTGGGCCCG GCCTCGCTCA AGCTGGGCCT GGCCTCGCTG
GCGCGGCTGG ACCCCGTGCG GCTGGCGCGC GAACGCATGC CCGCACTCAT GGAGCGCATC
CACCACACGG CGGCCATCGC CGTCTGGGGC AACCACGGGC CGACCATCGT GCACTGGGAG
GAAAGCGCGC AGTCGGTCAC CGCCAACCTG CGCCTGGGCG ATGTCATGCC CATGCTGGCC
TCGGCCACCG GGCGCTGCTT CGCAGCCTGG CTGCCGCGCG AGGTCACGGC CCCGCTGCTG
GAGCCCGAAG TGGACAAGGC CCGCCGCATC CAGCGCAAGG ACCTGCCGCT CACGCCCGAG
GCCATAGACG CCATGCTGGC CGAGGTGCGC GAGCGCGGCA CCGCCCGCGT GGTCGATACC
GTGCTGCCCG GCATCGTGGC CTTTTGCACG CCGGTCTTCG ACTCCTCGGG CCATATCGTG
CTGGGCCTGA CCACGCTGGG CTCGATTGCC ACTTTCGACC CCGAATACGG CGGCGCCATC
GACGCGCCGC TGCGCGAGGC CTGCGTGCAG CTGTCCCAGG ACCTGGGCTG GAATGCCTGA
 
Protein sequence
MDKERAGIQS VEVGFTLLEA LTRARGPQML KDLASDAGMS AAKAHRYLVS FQRIGLVTQD 
ARTSRYDLGP ASLKLGLASL ARLDPVRLAR ERMPALMERI HHTAAIAVWG NHGPTIVHWE
ESAQSVTANL RLGDVMPMLA SATGRCFAAW LPREVTAPLL EPEVDKARRI QRKDLPLTPE
AIDAMLAEVR ERGTARVVDT VLPGIVAFCT PVFDSSGHIV LGLTTLGSIA TFDPEYGGAI
DAPLREACVQ LSQDLGWNA