| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1118 |
|---|
| Symbol | |
|---|
| ID | 5746673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1242618 |
|---|
| End bp | 1243184 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296198 |
|---|
| Product | GlpP family transcriptional regulator |
|---|
| Protein accession | YP_001562148 |
|---|
| Protein GI | 160896566 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCC CGGACAACTC CCTGGGCGCG CGGCTGGCGC GCCGCCCCGT CATCGCCACC
CTGTACGGGG CCGAGCAGAT GGACGCGCTG CTGGCCAGCC AGGCCGAAGT CGCCATCGTC
GCCAACATCG AACTGCGCCG CCTGCGCTCG GTGATCTCCA CCATCACCGG GGCGGGCAAG
ATCGCCATCG TCAACATCGA CAGCTGCGAC GGCATCTCGC CCGACAAGGG CGGCGTGGAC
TACCTTGTGG ACCTGGGCGC CAGCAGCCTG CTGTCCACGC GCGTGGCCAC CATCCAGCGC
GCCAACAAGG CCGGGCTGCT GACCATGCAA AAAGTCTTCG TCACCGACCG CTCCACCTGG
CCGCGCAGCA TCAAGGCCGT GGAGCAGAGC GACCCCAACC TCGTGCAGAT CATGCCCGCC
CCCATGCTGG CCCACATCAC CGAGGCCGAG CGCCGCATCC TGCCGCCCCT GGTGGCCTCG
GGCTTCGTCT GCAGCCAGGA GCAGGTCCAG CAGGCGCTGG CCGGTGGTGC GATTGCGGTG
TCTACCAGCG ACAGTGGGCT GTGGTGA
|
|---|
| Protein sequence | MGRPDNSLGA RLARRPVIAT LYGAEQMDAL LASQAEVAIV ANIELRRLRS VISTITGAGK
IAIVNIDSCD GISPDKGGVD YLVDLGASSL LSTRVATIQR ANKAGLLTMQ KVFVTDRSTW
PRSIKAVEQS DPNLVQIMPA PMLAHITEAE RRILPPLVAS GFVCSQEQVQ QALAGGAIAV
STSDSGLW
|
|---|
| |