Gene Daci_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1116 
Symbol 
ID5746671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1240865 
End bp1241443 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID641296196 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001562146 
Protein GI160896564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTTG CCGTGGCCCC GCGCCCGCAG GGCGATGCCG TGCCCGGCTG GCGCGCGCCC 
GGCACGGGCT TCGACCAGCC CTTCGAGATG CTCGAAGCCT GCCACGAGCG CGTGCTGCGC
ATGCTGGCGC TGCTGGACCG GTTGCGCGTG CATCTCCAGA CCAAAGGTTG CGACGACAGC
GCACGCCACG CGGCGCGCGA CATCCTGCGC TACTTCGACC AGGCGGCGCC GCTGCACCAT
GAGGACGAGG AGCTGCATGT CTTCCCGCCG CTGCTGGAGC AGGGCGATGC GCAGACCGTG
GCCCTGGTGC AGCGCCTGCA GCGTGAGCAC GGCCTGATGA GCGCCGACTG GGCGCTGGCG
CGCCAGCCGC TGCTGGACAT GGCCGAGGGG CGTTGCCAGG GCTTTGGCGC GGCTGACGAG
GCGGTGTTCG AACGCTTCGC GGCCTGCTAT GCCAGCCATG TCGAGAATGA AGAGCGGCTG
GCCTACCCCC AGGCGCGCGG CCTGCTGCCA GAGGCAACGC AGGCGGCCAT GGGCCGTGAG
ATGGCCGTGC GGCGCGGCGC TGACCTGTCA CGGAGATAG
 
Protein sequence
MKVAVAPRPQ GDAVPGWRAP GTGFDQPFEM LEACHERVLR MLALLDRLRV HLQTKGCDDS 
ARHAARDILR YFDQAAPLHH EDEELHVFPP LLEQGDAQTV ALVQRLQREH GLMSADWALA
RQPLLDMAEG RCQGFGAADE AVFERFAACY ASHVENEERL AYPQARGLLP EATQAAMGRE
MAVRRGADLS RR