| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1115 |
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| Symbol | |
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| ID | 5746670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1238346 |
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| End bp | 1240868 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296195 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_001562145 |
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| Protein GI | 160896563 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGT GCTTGTCGAC TGAGGCCCGA GCAAGTGCCA GGGACGGCGG CAGGCAAGTC
AACACGGGAG CCATGCCAAT GCATCGCGAA AACCTGGGCC GCGCGCAGGA CGCGGCGGAT
CTGCAGCCCA TCAGCCTCGA TGTGCTGCGC GAGAAATACC TCAAGGACGG CGAGACCGGC
GTGGGCGAGC TCTACGCCCG CGTGGCCCGC GCCCTGGCCT CGGTCGAGCC CGAGGCGCGC
CGCGCCGAAT GCGAGGCCCT GTTCCTGGCC AACCTGCAGG CCGGCGCCAT AGGCGCGGGG
CGCATCATGA GCGCGGCCGG CACCGACCTG CAGGCCACGC TGATCAACTG CTTCGTGCAG
CCCGTGGGCG ACTGCATCCA GGGCGTGGAC GACGGCGGCT ACCCCGGCAT CTACGAAGCC
CTGCGCGAAG CCGCCGAAAC CATGCGCCGT GGCGGCGGCG TGGGCTACGA CTTCTCGCGC
ATCCGCCCCC GTGGCGCCGA GGTGCGCGCC ACCGCCTCGC TGGCCTCGGG CCCGTGCAGC
TACATCAACG TCTTCGACCA GTCCTGCGCC ACCGTGGAAA GCGCGGGCGC GCGGCGCGGC
GCCCAGATGG GCGTGCTGCG CATCGACCAC CCCGACGTGC TCGAATTCAT CACCGCCAAG
CGCACGCCGG GCCGCTGGAA CAACTTCAAC GTCTCGGTCG GCGTCAGCGA CGCCTTCATG
CAAGCCGTGG CCGAAGACCA GCCCTGGCAC CTGGTGCACC GCGCCCGCCC CGGCACCGCC
CTGCTGGAGC AGGGTGCCCA CCAGCGCGCC GACGGCCAGT GGGTCTACCA GACCCTGCCC
GCCCGCACGC TGTGGGACAC CATCATGCGC TCGGCCTACG ACTTCGCCGA GCCCGGCATC
CTCTTCCTGG ACCACATCAA CGACGACAAC AACCTGCGCT ACTGCGAGGA GATCGCGGCG
ACGAATCCTT GCGGCGAACA GCCGCTTCCC TCCTACGGCT GCTGCGACCT CGGCCCCGTC
ATCCTCACGC GCTTCGTGCG CCATCCGTTC GGCTTCGCGG GCGAGCCTGT GTTCGACTTC
GAGGCCTTCG AGCGCGCCGT GGCCGTGCAG GTGCGTGCGC TGGACAACGT GCTGGAGCTG
ACCTGGTGGC CGCTGCCGCA GCAGCGCGAG GAAAGCGAGG CCAAGCGGCG CATCGGCGTG
GGCTTCACGG GCATGGGCAA TGCGCTGGCC ATGCTGCGCC TGCGCTACGA CGCGCCCGAG
GGCCGGGCCA TGGCCGCGCG CATTGCCGAG CGCATGCGCG ATGCGGCCTA TGGCGCCTCG
GTGGAGCTGG CGCGCGAGAA GGGGGCCTTC CCCAAGTTCG ACGCCGATGG CTACCTGGCC
GAAGGCACCT TCGCCAGCCG CCTGCCCGAG GCGCTGCGCC AGCGCATACG CACGCACGGC
ATACGCAACA GTCACCTGCT GTCCATCGCG CCCACGGGCA CGGTCAGCCT GGCCTTTGCC
GACAACGCTT CCAACGGCAT AGAGCCGCCG TTCTCCTGGA CCTACAAGCG CAAGAAACGC
ACGGCCGATG GCGGCAGCGC CGAGTACGCG GTCGAAGACC ATGCCTGGCG CCTGTACCGC
TCGCTGGGCG GCGACGTGCA GCAGCTGCCC GCGTACTTCG TCAGCGCGCT GCAGATGCCT
GCGGCCGGCC ACATCGCCAT GATGCAGGCC GTGCAGCCCT TCGTGGACAC GGCGATTTCC
AAGACCGTCA ACGTGGCAGC CGACTATCCC TACGAGGACT TCAAGGACCT GTACCGACAG
GCCTGGAAGG CCGGCCTCAA GGGCCTGGCC ACCTACCGGC CCAACACCAT CCTCGGCGCC
GTGCTCGAGA CCCATGCGCC CGAATCTGCT GAAAAGCCGG CCTCCCCCGC GCCGGCAGGG
GCCTCGGCTT CCGCTCCCGA CCCGCTGCGC ACCGTGATAG AAAGCCGCCC GCAGGGCGCG
CTGGACGCCG TGGCCGAGAA GATCGAGTAC TGGACCCAGC AAGGCCCCAA GCGCCTGTAC
CTGGTCGTCT CCTTCCTGCC CGTGGTCCTG CCCGATGGCC GCACGGTGGA CCGCGCCATC
GAATTCTTCA TGCCCGTGGG CCAGAGCGGC GAATCCCAGC AATGGGTGAC CTCCAGCATG
CGCCTGCTGT CACTGGCCGC GCGCGGCGGC TTCCTGGAGC GCGCCCTCAG CGATATGCGC
AAGGTGGCCT GGGACCGGGG CCCCGTGCGC CTGGGCACCC ACCAGCGCGA CGACGGCGCG
CGCGTGCCCA TGTGGCACGA CTCCGAGGTG GCCGCCATCG CCTATGCGGT GCAGAACATT
CTGGCCCGGC GCGGCAGCGG CGCGCCGCCC GCGCCATCGC CGCTGCCCGA GCCCGAGGCC
CTGGCCACCG ACTCCATGGT CATGGCCGGC CGCAAATGCG AGGAATGCGG CGCCCATGCC
GTGATCCGCA AGGACGGCTG CGAGTACTGC ACGGCCTGCG GCCATCTGGG GAGCTGTGGG
TGA
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| Protein sequence | MDKCLSTEAR ASARDGGRQV NTGAMPMHRE NLGRAQDAAD LQPISLDVLR EKYLKDGETG
VGELYARVAR ALASVEPEAR RAECEALFLA NLQAGAIGAG RIMSAAGTDL QATLINCFVQ
PVGDCIQGVD DGGYPGIYEA LREAAETMRR GGGVGYDFSR IRPRGAEVRA TASLASGPCS
YINVFDQSCA TVESAGARRG AQMGVLRIDH PDVLEFITAK RTPGRWNNFN VSVGVSDAFM
QAVAEDQPWH LVHRARPGTA LLEQGAHQRA DGQWVYQTLP ARTLWDTIMR SAYDFAEPGI
LFLDHINDDN NLRYCEEIAA TNPCGEQPLP SYGCCDLGPV ILTRFVRHPF GFAGEPVFDF
EAFERAVAVQ VRALDNVLEL TWWPLPQQRE ESEAKRRIGV GFTGMGNALA MLRLRYDAPE
GRAMAARIAE RMRDAAYGAS VELAREKGAF PKFDADGYLA EGTFASRLPE ALRQRIRTHG
IRNSHLLSIA PTGTVSLAFA DNASNGIEPP FSWTYKRKKR TADGGSAEYA VEDHAWRLYR
SLGGDVQQLP AYFVSALQMP AAGHIAMMQA VQPFVDTAIS KTVNVAADYP YEDFKDLYRQ
AWKAGLKGLA TYRPNTILGA VLETHAPESA EKPASPAPAG ASASAPDPLR TVIESRPQGA
LDAVAEKIEY WTQQGPKRLY LVVSFLPVVL PDGRTVDRAI EFFMPVGQSG ESQQWVTSSM
RLLSLAARGG FLERALSDMR KVAWDRGPVR LGTHQRDDGA RVPMWHDSEV AAIAYAVQNI
LARRGSGAPP APSPLPEPEA LATDSMVMAG RKCEECGAHA VIRKDGCEYC TACGHLGSCG
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