Gene Daci_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1111 
Symbol 
ID5746666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1235307 
End bp1236020 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID641296191 
Productnitrate reductase molybdenum cofactor assembly chaperone 
Protein accessionYP_001562141 
Protein GI160896559 
COG category[C] Energy production and conversion 
COG ID[COG2180] Nitrate reductase delta subunit 
TIGRFAM ID[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATC ACAACACCTC CTCCCCCGTG CGCCTGACGC TGCGCGCGCT GGCCTGCCTC 
ATCGGCTACC CCGGCGCCGA GCTGCGCGCC CTGCTGCCGG GCCTGATCGA CGCCCTGCGC
CTGGAGCAAT CCGTGGCGCC CGCGCGGCTG CGCGAGTTGC AGCAGCTGGC CGAGCAGCTG
CAGGCCATGG ACCCCTTCGA GGCCGAGGCC CGCTACGTGG ACACCTTCGA CCGGGGCCAC
CAGACCTCGC TGCACCTGTT CGAGCATGTG CACGGCGACT CGGCCGACCG GGGCCCGGCG
CTGATCGACC TGCAGCAGAC CTACGAGCGC GCGGGCCTGG CCTTCGAGGC CGACGAACTG
CCCGACCACC TGGCCGTGGT GCTGGAGTTC GCCTCCACCC AGCCGCCGGC CATCGCCCGT
GGATTCCTGG GCGAGATGGC CCACATCCTC AACGCCCTGT TCACGGCGCT GGCGCGGCGC
GACAGCCCCT ACGCCAGCGT GATCGCGGCC GTGCTGGAGA TCACCGGCCA CAGGGCCGAG
CGCGTGGAAA TCCGCCCCGA GCCCGCCATG GACGAGGCCT GGGCCGAACC CGCCGCCTTC
GACGGCTGCA GCAGCCAGGG CCAATCGCGC CCCGGCGCCG AGCAGCCCGT GCATTTCGTG
CGCCGCACGG CGGCGCCCCA AGCCCAAGGA CCCCGCCAAA GGAGCCTGAC ATGA
 
Protein sequence
MFNHNTSSPV RLTLRALACL IGYPGAELRA LLPGLIDALR LEQSVAPARL RELQQLAEQL 
QAMDPFEAEA RYVDTFDRGH QTSLHLFEHV HGDSADRGPA LIDLQQTYER AGLAFEADEL
PDHLAVVLEF ASTQPPAIAR GFLGEMAHIL NALFTALARR DSPYASVIAA VLEITGHRAE
RVEIRPEPAM DEAWAEPAAF DGCSSQGQSR PGAEQPVHFV RRTAAPQAQG PRQRSLT