| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1109 |
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| Symbol | |
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| ID | 5746664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1229737 |
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| End bp | 1233576 |
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| Gene Length | 3840 bp |
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| Protein Length | 1279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296189 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_001562139 |
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| Protein GI | 160896557 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATT TTCTGGACAA GCTTTCCTAC TTCTCCCTGC CCCGGCAGGA ATTCTCCAAC
GGCCATGGCC AGGTGACGGG CGAGGACCGC ACCTGGGAAG ACGCCTACCG CGACCGCTGG
GCGCATGACA AGGTGGTGCG CTCCACGCAC GGCGTGAACT GCACGGGCTC GTGCTCGTGG
AAGATCTACG TCAAGGGCGG CATCGTGACC TGGGAGACCC AGCAGACCGA CTACCCGCGC
ACGCGCGCCG ACCTGCCCAA CCACGAGCCG CGCGGCTGCG CGCGCGGCGC CAGCTACAGC
TGGTATCTGT ACAGCGCCAA CCGCGTCAAA TACCCCATGG TGCGCGGCCG GCTGCTCAAG
CACTGGCGCG CCGCCCTGGC CGTGGCCAGG AGCCCGGTCG ATGCCTGGGC CGCCATCGTC
GAGAACGCGG ATGCGCGCAG CGAGTGGCAG AAGCAGCGCG GCCTGGGCGG CTTCGTGCGC
AGCAGCTGGG ACGAGGTCAA CCGCATGATC GCGGCGGCCA ACGTCTACAC CATCAAGAAG
CACGGGCCGG ACCGCATCAT CGGCTTCTCG CCGATTCCGG CCATGTCCAT GATCTCGTAT
GCCGCAGGCA GCCGCTACCT GAGCCTGATC GGCGGCGTGT GCATGAGCTT CTACGACTGG
TACTGCGACC TGCCGCCGGC CAGCCCCCAG ACCTGGGGCG AGCAGACCGA CGTGCCAGAG
AGCGCGGACT GGTACAACTC CAACTTCATC ATCGCCTGGG GCTCCAACGT GCCCCAGACG
CGCACCCCCG ATGCCCACTT CTTCACCGAG GTCCGCTACA AGGGCGCCAA GGTCGTGGCC
GTCACGCCCG ACTACTCCGA GGTCGCCAAG CTGGCCGACC TGTGGATGCA CCCCAAGCAG
GGCACGGATG CCGCCGTGGC CATGGCCATG GGCCACGTCA TCCTCAAGGA GTTCTACTTC
GGCGAGCGCG GCCGCCCGGC CTATTTCGAG GACTATGCGC GCCGCTACAC CGACCTGCCG
CTGCTGATTC GCCTCAAGCG CCAGCAACTG CCCGATGGCC GCACGGTCCT GGTGCCCGAG
CGCTATGTGC GCGCCAGCGA CTTCGACGGC CACCTGGGCC AGGACAGCAA TCCCGAATGG
AAGACCGTGG CCTACGGCGA GGACGGCGGC GTGGCCCTGC CCAACGGCTC CATCGGCTTT
CGCTGGGGCG AGGCCGGCCG CGCCGACGAG GGCCTGTGGA ACCTCGAATC CAAGGAGGCG
CGCACGGGCA ATGACGTGCA GCTCAAGCTC TCGGTGCTGG ACGGCCAGGG CGTGGACAGT
GAAGTGGCCG ACGTGGCCTT CCCCTACTTC GGCGGCCTGC AGTCGCCGGG CTTCGACGCC
AACGAGCAGG GCACGGATGT GCTGCTGCGC CGCGTGCCTG TCTCGCGCAT GGTGCTGGAC
GGCGAGGAGG CCATCGTGGC CACCGTGTTC GACCTGCTGG CGGGCAACTA CGGCATCCAC
CGCGGCCTGG AAGGCGAGGG CGCTGATGGC GGCTATGACG CCGATGCGCC CTACACCCCG
GCCTGGCAGG AAAAGATCAC CGGCGTGCCG CGTGACCAGG TGATCGCCAT TGCGCGCCAG
TTCGCCGACA ACGCCGAGAA GACGCGCGGC AAGTCCATGG TCATCATCGG CGCGGCCATG
AACCACTGGT ACCACTGCGA CATGAACTAC CGCGGCATCA TCAACATGCT GATGCTGTGC
GGCTGCATAG GCCAGAGCGG CGGCGGCTGG GCGCACTACG TGGGCCAGGA AAAGCTGCGC
CCGCAGACCG GCTGGACCGC GCTGGCCTTT GCGCTGGACT GGCTGCGCCC GCCGCGCCAG
ATGAACTCCA CCAGCTTCTT CTACGCCCAC ACCGACCAGT GGCGCTACGA GAAGCTGGGT
GTGGAAGAGG TGCTGTCCCC GCTGGCCGAC CGCAGCCAGT ACGGCGGCGC CATGATCGAC
TACAACGTGC GCGCCGAGCG CATGGGCTGG CTGCCCAGCG CCCCGCAGCT GCAGGCCAAC
CCGCTGCAGC TGGTGCGCGA CGCCCAGGCC CAGGGCCTGG ACGTGAAGGA CCACGTGGTG
CAGTCCCTGC AGGACGGCTC GCTGTCCATG AGCTGCGAGG ACCCCGACCA CCCGGCCAAC
TGGCCGCGCA ACATGTTCGT GTGGCGCTCC AACATCCTGG GCAGCTCGGG CAAGGGCCAC
GAGTACTTCC TCAAGCACCT GCTGGGCACC ACCCATGGCG TGCAAGGAAA AGACCTTGGA
GAACAAGACC CCCCCGATGC GCTGCGCGCC TCCTCCCAGG GGGCGGCCGG CTTGGGGCGG
CCCGGCGCCG GCCATTCGGC CAAGCCGCAG GAAGTGCGCT GGCACGACAA GGCGCCCGAA
GGCAAGCTGG ACCTGCTGGT CACGCTGGAC TTCCGCATGA GCACCACCTG CCTGTACTCG
GACATCGTCC TGCCCACGGC CACCTGGTAT GAGAAGAACG ACCTCAACAC CAGCGACATG
CACCCCTTCA TCCATCCGCT GTCGGCGGCC GTGGACCCGG CCTGGCAGGC CAGGAGCGAC
TGGGAGATCT ACAAGGGCTT CGCCAAGTCC TTCAGCGAGG TCTGCGTGGG CCACCTGGGC
GTGGAAAAGG ACGTGGTGCT CACGCCGCTG ATGCACGACA CCCCCGCCGA GCTGGCCCAG
CCCGATGGCG TGCGCGACTG GAAGAAGGGC GAGTGCGCCC TGATCCCCGG CAAGACCGCG
CCGCAGATTG CCGTGGTCGA GCGCGACTAT CCCAACCTCT ACAAGCGCTT CACGGCCCTG
GGCCCGCTGA TGGACAGGCT GGGCAACGGC GGCAAGGGCA TCGGCTGGAA CACCGAGACC
GAGGTGGAGC AGCTGGGCGA GCTCAACGGC CTGGTGCGCG AGGAAGGCGT GAGCCAGGGC
CGCCCGCGCA TCGTCACCGA CATCGACGCC ACCGAGGTGG TGATGATGCT GGCGCCCGAG
ACCAACGGCC ACGTGGCCGT CAAGGCCTGG GAGGCGCTGT CGAAGCAGAC GGGGCGCGAG
CACGCCCACC TGGCCCTGCA CCGCGAGGAC GAGAAGATCC GCTTTCGCGA CATCCAGGCC
CAGCCGCGCA AGATCATCAG CTCGCCCACC TGGTCGGGCC TGGAAAGCGA GAAGGTCAGC
TACAACGCCT GCTACACCAA CGTGCATGAG CTGATCCCAT GGCGCACCCT CACCGGCCGC
CAGCAGTTCT ACCAGGACCA TCCGTGGATG CGCGACTTCG GCGAAGGCTT CGTCAGCTAC
CGCCCGCCCG TGCACATGAA GGCGCTGCAG GAAGTGCAGG GCCAAAAGCC CAACGGCCAC
CCCGAGATCG CGCTGAACTT CATCACGCCG CACCAGAAGT GGGGCATCCA CTCCACCTAT
GGCGACAACC TGATGATGCT CACGCTGGCG CGTGGCGGCC CCATCGTCTG GCTCAGCGAG
GACGACGCCA AGAGCGCCGG CATCGCCGAC AACGACTGGG TGGAGCTGTA CAACGCCAAC
GGCGCCATCG CGGCGCGGGC CGTGGTCAGC CAGCGCGTCA AGCCGGGCAT GGTGATGATG
TACCACGCGC AGGAGAAGAC CATCAACACG CCGGGCTCGG AGATCACCGG CACGCGCGGC
GGCATCCACA ACTCGGTCAC GCGCATCGTG CTCAAGCCCA CCCACATGAT CGGCGGCTAC
GCGCAGTACA GCTACGGCTT CAACTACTAC GGAACCATCG GCACCAACCG TGACGAATTT
GTCCTGGTGC GCAAGATGCG CCGCATAGAT TGGCTGGATG AAGAGGTGAA CACCCCCTGA
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| Protein sequence | MSHFLDKLSY FSLPRQEFSN GHGQVTGEDR TWEDAYRDRW AHDKVVRSTH GVNCTGSCSW
KIYVKGGIVT WETQQTDYPR TRADLPNHEP RGCARGASYS WYLYSANRVK YPMVRGRLLK
HWRAALAVAR SPVDAWAAIV ENADARSEWQ KQRGLGGFVR SSWDEVNRMI AAANVYTIKK
HGPDRIIGFS PIPAMSMISY AAGSRYLSLI GGVCMSFYDW YCDLPPASPQ TWGEQTDVPE
SADWYNSNFI IAWGSNVPQT RTPDAHFFTE VRYKGAKVVA VTPDYSEVAK LADLWMHPKQ
GTDAAVAMAM GHVILKEFYF GERGRPAYFE DYARRYTDLP LLIRLKRQQL PDGRTVLVPE
RYVRASDFDG HLGQDSNPEW KTVAYGEDGG VALPNGSIGF RWGEAGRADE GLWNLESKEA
RTGNDVQLKL SVLDGQGVDS EVADVAFPYF GGLQSPGFDA NEQGTDVLLR RVPVSRMVLD
GEEAIVATVF DLLAGNYGIH RGLEGEGADG GYDADAPYTP AWQEKITGVP RDQVIAIARQ
FADNAEKTRG KSMVIIGAAM NHWYHCDMNY RGIINMLMLC GCIGQSGGGW AHYVGQEKLR
PQTGWTALAF ALDWLRPPRQ MNSTSFFYAH TDQWRYEKLG VEEVLSPLAD RSQYGGAMID
YNVRAERMGW LPSAPQLQAN PLQLVRDAQA QGLDVKDHVV QSLQDGSLSM SCEDPDHPAN
WPRNMFVWRS NILGSSGKGH EYFLKHLLGT THGVQGKDLG EQDPPDALRA SSQGAAGLGR
PGAGHSAKPQ EVRWHDKAPE GKLDLLVTLD FRMSTTCLYS DIVLPTATWY EKNDLNTSDM
HPFIHPLSAA VDPAWQARSD WEIYKGFAKS FSEVCVGHLG VEKDVVLTPL MHDTPAELAQ
PDGVRDWKKG ECALIPGKTA PQIAVVERDY PNLYKRFTAL GPLMDRLGNG GKGIGWNTET
EVEQLGELNG LVREEGVSQG RPRIVTDIDA TEVVMMLAPE TNGHVAVKAW EALSKQTGRE
HAHLALHRED EKIRFRDIQA QPRKIISSPT WSGLESEKVS YNACYTNVHE LIPWRTLTGR
QQFYQDHPWM RDFGEGFVSY RPPVHMKALQ EVQGQKPNGH PEIALNFITP HQKWGIHSTY
GDNLMMLTLA RGGPIVWLSE DDAKSAGIAD NDWVELYNAN GAIAARAVVS QRVKPGMVMM
YHAQEKTINT PGSEITGTRG GIHNSVTRIV LKPTHMIGGY AQYSYGFNYY GTIGTNRDEF
VLVRKMRRID WLDEEVNTP
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